Protein Concepts Dictionary

Tableau information

Concept source:  d3f8ya_  amino acid (a.a.) range (LEU4)(ASP186)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEEHHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU4)    (ALA9) E1
	   (LEU27)   (THR39) H2
	   (ASN48)   (GLY53) E3
	   (GLY53)   (SER59) H4
	   (PRO61)   (ARG65) H5
	   (ILE71)   (SER76) E6
	   (HIS87)   (ARG91) E7
	   (SER92)  (GLN102) H8
	  (GLN102)  (LYS108) H9
	  (MET111)  (GLY116) E10
	  (SER118)  (HIS127) H11
	  (HIS130)  (MET139) E12
	  (ASP168)  (LYS173) E13
	  (GLY174)  (ASP186) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2     -173.7°   H2                                                                                         
E3      -66.0°  116.3°   E3                                                                                  
H4       51.0° -123.8°  109.9°   H4                                                                           
H5      160.9°  -13.9° -128.1°  110.0°   H5                                                                    
E6      -79.2°  103.7°  -14.2° -124.0° -116.4°   E6                                                             
E7      -99.2°   85.8°  -44.9° -150.1°   99.7°  -32.3°   E7                                                      
H8      126.0°  -49.6°  156.3°  -75.5°   35.9°  149.8°  134.3°   H8                                               
H9       67.7° -112.5° -127.8°   51.2°  103.0° -135.7° -125.3°  -74.1°   H9                                        
E10     -44.9° -137.0°  -21.0°   90.7° -147.9°  -34.6°  -61.3°  159.5°  109.1°   E10                                
H11    -137.2°   48.0°  117.3° -128.5°   53.0°  104.4°   72.4°  -69.7°  -83.0° -130.4°   H11                         
E12      -4.4°  171.7°  -70.3°   47.9°  157.9°  -83.4° -102.4°  122.4°   63.3°  -49.3° -134.9°   E12                  
E13     -46.9° -128.6°  -56.9°   58.7°  125.6°  -69.3° -101.6°  113.6°  104.1°  -45.9° -172.7°  -49.6°   E13           
E14     160.4°  -25.4°   98.4° -148.5°  -38.7°   84.4°   61.4°  -73.1° -119.6°  119.0°   38.2°  162.7°  135.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1dlra_ :     (LEU4)  (ASN185)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d1dr1a_ :     (ARG2)  (SER185)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Chicken (Gallus gallus) [TaxId: 9031]
 d3f91a_ :     (LEU4)  (ASP186)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d2fzja_ :     (PRO3)  (LYS185)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Mouse (Mus musculus) [TaxId: 10090]
 d3nxoa_ :     (LEU4)  (ASP186)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d3k45a_ :     (PRO3)  (LYS185)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Mouse (Mus musculus) [TaxId: 10090]
 d3f8ya_ :     (LEU4)  (ASP186)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.71