Protein Concepts Dictionary

Tableau information

Concept source:  d2fkpa1  amino acid (a.a.) range (GLU138)(CYS313)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU138)  (GLY144) E1
	  (GLN150)  (GLN162) H2
	  (ARG166)  (LYS170) E3
	  (LYS172)  (PHE187) H4
	  (ARG191)  (ASN197) E5
	  (THR201)  (ASP215) H6
	  (LEU228)  (ILE238) H7
	  (PRO241)  (GLU246) E8
	  (SER250)  (GLY261) H9
	  (GLY264)  (LYS269) E10
	  (LYS269)  (GLY274) H11
	  (HIS276)  (GLY290) H12
	  (ALA291)  (LEU299) E13
	  (GLY302)  (CYS313) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      159.5°   H2                                                                                         
E3      -19.3°  151.8°   E3                                                                                  
H4      132.4°  -52.5°  151.7°   H4                                                                           
E5      -46.8°  124.6°  -28.5°  171.7°   E5                                                                    
H6      129.1°  -54.1°  148.4°   -4.8°  167.4°   H6                                                             
H7       94.0°  -98.4°  109.5°  -47.8°  136.8°  -48.2°   H7                                                      
E8      -78.7°   85.7°  -66.2°  130.9°  -42.5°  129.1°  166.3°   E8                                               
H9       79.3° -119.0°   88.2°  -76.1°  110.4°  -77.5°  -31.2°  152.9°   H9                                        
E10     -85.1°   74.7°  -82.0°  103.8°  -68.1°  100.7°  136.4°  -32.3°  157.7°   E10                                
H11      89.3°  -92.0°   70.0° -137.5°   46.2° -141.5° -138.9°   53.4°  110.8°   84.7°   H11                         
H12      98.4° -100.8°  105.1°  -65.1°  122.6°  -67.9°  -31.9°  160.0°  -19.5° -167.6°  107.1°   H12                  
E13     -57.0°  102.5°  -59.9°  112.5°  -59.5°  108.0°  120.0°  -46.3°  128.4°  -30.5°   95.9°  146.4°   E13           
H14     130.2°  -70.2°  128.8°  -59.2°  128.6°  -63.8°  -57.8°  135.5°  -55.0°  144.2°   89.6°  -35.8° -171.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2zc8a2 :   (GLU131)  (ALA305)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d4a6gb2 :   (PRO131)  (LEU305)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Amycolatopsis sp. [TaxId: 37632]
 d1sjba1 :   (PRO131)  (SER307)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |N-acylamino acid racemase |Amycolatopsis sp. [TaxId: 37632]
 d1jpdx1 :   (GLU117)  (ALA286)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |L-Ala-D/L-Glu epimerase |Escherichia coli [TaxId: 562]
 d4mmwa2 :   (ASP129)  (THR322)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d2fkpa1 :   (GLU138)  (CYS313)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |N-acylamino acid racemase |Deinococcus radiodurans [TaxId: 1299]
 d4ggha2 :   (ASP119)  (HIS326)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Vibrio harveyi [TaxId: 673519]
 d1r0ma1 :   (GLU138)  (SER312)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |N-acylamino acid racemase |Deinococcus radiodurans [TaxId: 1299]
 d1dtna1 :   (GLN135)  (THR310)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Mandelate racemase |Pseudomonas putida [TaxId: 303]
 d1wufa1 :  (GLU1129) (ALA1307)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |N-acylamino acid racemase |Listeria innocua [TaxId: 1642]
 d4hcha2 :   (ASP129)  (THR322)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d1sjaa1 :   (ASP128)  (SER307)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |N-acylamino acid racemase |Amycolatopsis sp. [TaxId: 37632]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1