Protein Concepts Dictionary

Tableau information

Concept source:  d3no1c2  amino acid (a.a.) range (LEU152)(PHE340)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU152)  (ALA156) E1
	  (SER167)  (GLY179) H2
	  (ALA181)  (VAL187) E3
	  (SER191)  (GLY207) H4
	  (ILE211)  (ALA216) E5
	  (PRO222)  (ALA233) H6
	  (ASN248)  (TYR258) H7
	  (VAL262)  (GLY267) E8
	  (ALA273)  (GLY283) H9
	  (ASP286)  (ASP291) E10
	  (GLY297)  (ASP312) H11
	  (ASP312)  (HIS317) E12
	  (PRO321)  (GLN331) H13
	  (ILE336)  (PHE340) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      147.2°   H2                                                                                         
E3      -41.8°  152.3°   E3                                                                                  
H4      122.2°  -41.3°  163.7°   H4                                                                           
E5      -49.1°  133.3°  -20.0°  160.4°   E5                                                                    
H6      114.4°  -66.6°  140.7°  -32.1°  160.0°   H6                                                             
H7      104.5°  -89.8°  114.7°  -61.1°  134.6°  -29.1°   H7                                                      
E8      -91.0°   69.4°  -87.0°   97.8°  -67.1°  130.0° -158.3°   E8                                               
H9       94.1° -114.4°   81.9°  -98.5°   99.7°  -67.5°  -38.9°  156.7°   H9                                        
E10     -72.3°   77.7°  -89.9°   86.2°  -74.4°  114.2°  139.8°  -32.0°  166.0°   E10                                
H11     109.0° -101.6°   89.3°  -95.4°  104.1°  -68.1°  -43.1°  144.8°  -16.3°  176.7°   H11                         
E12     -54.1°   93.1°  -87.3°   81.6°  -79.9°   99.3°  116.8°  -60.7°  138.4°  -29.0°  154.1°   E12                  
H13     143.6°  -68.8°  112.2°  -79.8°  117.7°  -67.4°  -58.1°  116.2°  -51.4°  142.6°  -35.5° -160.4°   H13           
E14     -31.4°  115.9°  -66.7°  100.0°  -64.0°  108.5°  115.1°  -71.3°  121.6°  -44.4°  137.7°  -22.8° -172.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3op2b2 :   (ARG140)  (ASP331)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
 d3ozmd2 :   (ARG140)  (ASP331)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
 d3ozmh2 :   (ARG140)  (ASP331)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
 d3no1b2 :   (LEU152)  (PHE340)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
 d3ozma2 :   (ARG140)  (ASP331)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
 d4h83c2 :   (LEU152)  (HIS341)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
 d3op2a2 :   (ARG140)  (ASP331)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
 d1mraa1 :   (GLN135)  (ASP320)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Mandelate racemase |Pseudomonas putida [TaxId: 303]
 d1mdra1 :   (GLN135)  (ASP320)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Mandelate racemase |Pseudomonas putida [TaxId: 303]
 d3h12a2 :   (ARG140)  (ASP331)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
 d3no1c2 :   (LEU152)  (PHE340)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
 d3no1d2 :   (LEU152)  (PHE340)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
 d2p88a2 :   (GLU129)  (GLY323)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d3msyc2 :   (LEU152)  (HIS341)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
 d3msya2 :   (LEU152)  (HIS341)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
 d1mdla1 :   (GLN135)  (ASP320)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Mandelate racemase |Pseudomonas putida [TaxId: 303]
 d3no1f2 :   (LEU152)  (PHE340)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]
 d4h83a2 :   (LEU152)  (PHE340)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Marine actinobacterium [TaxId: 312284]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1