Protein Concepts Dictionary

Tableau information

Concept source:  d1rj9a2  amino acid (a.a.) range (ARG103)(GLY283)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG103)  (GLY109) E1
	  (GLY114)  (GLY130) H2
	  (LYS132)  (ALA137) E3
	  (ALA144)  (LEU156) H4
	  (ILE158)  (PRO164) E5
	  (SER169)  (GLY184) H6
	  (ASP186)  (THR192) E7
	  (HIS200)  (ASP217) H8
	  (ASP217)  (GLU223) H9
	  (VAL224)  (ASP229) E10
	  (ASN235)  (VAL247) H11
	  (GLY251)  (LYS256) E12
	  (VAL265)  (LYS274) H13
	  (LYS274)  (GLY283) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      155.4°   H2                                                                                         
E3      -33.2° -169.8°   E3                                                                                  
H4      135.3°  -21.1° -161.7°   H4                                                                           
E5      -54.8°  149.2°  -21.6° -161.0°   E5                                                                    
H6      153.2°   -4.8°  167.6°  -17.9°  149.5°   H6                                                             
E7      -19.7° -174.5°  -13.7°  153.5°  -35.2°  170.5°   E7                                                      
H8      175.3°  -23.8°  146.7°  -42.8°  125.4°  -25.2°  160.4°   H8                                               
H9      -49.1°  106.3°  -82.2°   87.4° -103.9°  104.8°  -68.9°  129.9°   H9                                        
E10     -37.6°  119.8°  -66.1°   98.7°  -86.5°  116.5°  -54.8°  139.1°   25.2°   E10                                
H11     138.8°  -65.8°  106.3°  -85.6°   84.8°  -67.9°  119.3°  -42.8° -170.0°  164.2°   H11                         
E12     -50.0°  111.9°  -71.0°   91.4°  -87.8°  107.6°  -62.9°  125.7°   40.1°  -18.8°  147.2°   E12                  
H13     127.5°  -71.6°  105.1°  -92.3°   87.9°  -75.7°  113.7°  -56.5° -142.5°  161.5°  -31.0°  175.6°   H13           
E14     -76.6°   91.9°  -86.5°   75.4°  -95.2°   87.1°  -83.8°   98.7°  -65.7°  -48.6°  119.2°  -30.0°  149.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2cnwd2 :   (ARG103)  (GLY283)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Thermus aquaticus [TaxId: 271]
 d1vmaa2 :    (PHE93)  (GLY273)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |GTPase domain of the signal recognition particle receptor FtsY |Thermotoga maritima [TaxId: 2336]
 d4c7ob2 :   (PHE100)  (GLY280)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1rj9a2 :   (ARG103)  (GLY283)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |GTPase domain of the signal recognition particle receptor FtsY |Thermus aquaticus [TaxId: 271]
 d4c7od2 :   (PHE100)  (GLY280)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1okkd2 :   (ARG103)  (GLY283)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |GTPase domain of the signal recognition particle receptor FtsY |Thermus aquaticus [TaxId: 271]
 d1ftsa2 :   (PHE294)  (VAL473)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |GTPase domain of the signal recognition particle receptor FtsY |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37