Protein Concepts Dictionary

Tableau information

Concept source:  d1ahia_  amino acid (a.a.) range (LYS12)(ALA191)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEHHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS12)   (GLY18) E1
	   (GLY22)   (GLY35) H2
	   (SER37)   (ILE43) E3
	   (ALA45)   (GLY59) H4
	   (GLN61)   (ARG66) E5
	   (SER71)   (GLY87) H6
	   (ASP90)   (ASN94) E7
	   (ALA96)  (PRO101) E8
	  (MET108)  (LEU117) H9
	  (VAL119)  (VAL129) H10
	  (PRO131)  (GLY137) H11
	  (GLY137)  (MET147) E12
	  (MET156)  (LEU177) H13
	  (ASN181)  (ALA191) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2     -167.0°   H2                                                                                         
E3      -13.5° -166.4°   E3                                                                                  
H4      146.9°  -26.9°  160.1°   H4                                                                           
E5      -31.4°  153.9°  -18.1° -177.7°   E5                                                                    
H6      150.0°  -18.2°  158.1°  -17.1°  161.9°   H6                                                             
E7      -12.6°  166.8°  -23.1°  140.1°  -38.8°  149.2°   E7                                                      
E8      -28.7°  158.0°  -35.5°  133.6°  -46.3°  148.4°  -16.8°   E8                                               
H9     -165.3°    7.4°  172.2°  -20.1°  161.0°  -15.7° -160.2° -150.9°   H9                                        
H10     157.5°  -23.1°  146.2°  -50.0°  130.9°  -38.8°  169.3° -166.4°  -30.1°   H10                                
H11    -165.9°   20.0° -172.1°  -24.6°  157.6°  -29.6° -153.8° -139.2°   15.5°  -36.6°   H11                         
E12     -26.2°  151.0°  -38.6°  124.2°  -54.8°  134.6°  -16.0°  -19.2°  144.2°  173.3° -139.8°   E12                  
H13     162.9°  -28.4°  150.1°  -49.8°  132.1°  -46.5°  160.9° -146.0°  -31.7°  -21.6°  -27.3° -159.7°   H13           
E14     -39.2°  132.9°  -52.6°  107.9°  -70.6°  115.1°  -34.1°  -40.2°  127.4°  152.4°  129.0°  -21.1° -156.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ydeh_ :    (LYS10)  (ASN186)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1yded_ :    (LYS10)  (ASN186)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1q7ca_ :     (LYS6)  (PHE183)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |beta-keto acyl carrier protein reductase |Escherichia coli [TaxId: 562]
 d2ewmb1 :     (LYS8)  (SER185)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |(s)-1-phenylethanol dehydrogenase |Azoarcus sp. ebn1 [TaxId: 76114]
 d1xkqa_ :     (LYS7)  (MET194)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Hypothetical protein R05D8.7 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d3qrwb_ :     (GLU7)  (PHE189)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d1ydep_ :    (LYS10)  (ASN186)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4dc0b_ :     (GLU7)  (TRP189)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d1ae1b_ :    (THR22)  (VAL203)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Tropinone reductase |Jimsonweed (Datura stramonium), I [TaxId: 4076]
 d3l77a_ :     (LYS2)  (GLY179)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermococcus sibiricus [TaxId: 604354]
 d2uvda_ :     (LYS5)  (PHE186)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Bacillus anthracis [TaxId: 198094]
 d4o6vc_ :     (LYS5)  (TRP179)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella suis [TaxId: 470137]
 d1ahia_ :    (LYS12)  (ALA191)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |7-alpha-hydroxysteroid dehydrogenase |Escherichia coli [TaxId: 562]
 d4o6vb_ :     (LYS5)  (TRP179)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella suis [TaxId: 470137]
 d4ospb_ :     (LYS7)  (ILE192)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces fradiae [TaxId: 1906]
 d1ipea_ :    (CYS10)  (VAL191)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Tropinone reductase |Jimsonweed (Datura stramonium), II [TaxId: 4076]
 d1ydef_ :    (LYS10)  (ASN186)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xkqb_ :     (LYS7)  (MET194)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Hypothetical protein R05D8.7 |Nematode (Caenorhabditis elegans) [TaxId: 6239]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2