Protein Concepts Dictionary

Tableau information

Concept source:  d3fpda_  amino acid (a.a.) range (GLN1012)(ALA1203)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (GLN1012) (SER1017) E1
	 (MET1043) (MET1049) H2
	 (LEU1070) (CYS1074) E3
	 (ARG1087) (GLY1092) H4
	 (ALA1095) (ARG1101) E5
	 (GLY1108) (GLN1113) E6
	 (GLN1113) (PRO1117) E7
	 (VAL1121) (GLU1127) E8
	 (SER1130) (ARG1137) H9
	 (TYR1142) (ASN1148) E10
	 (GLU1152) (ALA1158) E11
	 (ASN1175) (ALA1184) E12
	 (ARG1192) (SER1197) E13
	 (ARG1199) (ALA1203) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2       67.9°   H2                                                                                         
E3     -111.8° -175.5°   E3                                                                                  
H4      -77.7°   93.2°  -82.4°   H4                                                                           
E5       61.8°   44.8° -130.9°  -48.5°   E5                                                                    
E6     -151.5° -133.0°   49.1°  114.2°  145.7°   E6                                                             
E7      -76.9°  -72.9°  111.5° -154.2° -113.4°   90.6°   E7                                                      
E8       19.1°   79.6°  -98.9°  -60.9°  -58.9°  146.7°  -94.7°   E8                                               
H9       87.2°  -56.8°  118.9°   44.1°   26.0°  119.7° -129.5°   81.0°   H9                                        
E10     -76.3°   93.9°  -90.3° -148.1°  128.6°  -82.5°   22.8°  -90.0° -150.3°   E10                                
E11     120.5° -101.1°   75.2°   43.6°  -70.4°   78.6° -158.6°  104.5°   47.1°  160.8°   E11                         
E12     -69.7°  133.5°  -48.3°  -95.6° -123.5°   83.1°   79.9°  -65.7°  138.1°  -57.9°  116.4°   E12                  
E13     143.5°  -76.1°  103.6°   98.9°   88.4°  -63.0°  -98.6°  147.3°  -67.5°  113.0°  -60.0°  146.1°   E13           
E14     108.3°  108.1°  -67.6°   30.9°   69.5°  -84.9° -174.7°   90.6°   51.3° -157.8°   16.7° -102.4°   76.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2o8jb_ :   (GLU955) (THR1146)   [view usage] : b.85.7.0 |beta-clip |SET domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mvha_ :   (GLY248)  (PRO443)   [view usage] : b.85.7.1 |beta-clip |SET domain |Histone lysine methyltransferases |SET domain of Clr4 |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d3fpda_ :  (GLN1012) (ALA1203)   [view usage] : b.85.7.0 |beta-clip |SET domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fpdb_ :  (GLN1012) (ALA1203)   [view usage] : b.85.7.0 |beta-clip |SET domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.85