Protein Concepts Dictionary

Tableau information

Concept source:  d3t88a_  amino acid (a.a.) range (PRO121)(ASN271)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEEHHHEHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO121)  (ALA127) E1
	  (GLY132)  (CYS141) H2
	  (ASP142)  (ASP148) E3
	  (ASN149)  (GLY153) E4
	  (THR155)  (GLY160) H5
	  (ALA168)  (ILE174) H6
	  (GLN177)  (CYS187) H7
	  (ARG188)  (ALA192) E8
	  (ALA192)  (GLY199) H9
	  (ASN202)  (PRO206) E10
	  (LEU210)  (GLN223) H11
	  (SER225)  (GLY242) H12
	  (GLY242)  (THR260) H13
	  (THR260)  (ASN271) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2     -139.3°   H2                                                                                         
E3      -18.0° -121.6°   E3                                                                                  
E4      112.0° -102.6° -128.4°   E4                                                                           
H5       73.8° -145.7°   90.5°  -58.2°   H5                                                                    
H6      -86.0°   55.4°  -70.5° -126.8° -158.8°   H6                                                             
H7       45.9°  157.7°   59.9°  -89.3°  -33.1°  130.3°   H7                                                      
E8     -103.5°   42.4°  -86.1°  144.0° -142.8°   48.2° -121.1°   E8                                               
H9     -150.2°  -41.8° -144.6°   62.0° -117.1°   77.8° -150.1°  -84.1°   H9                                        
E10     -36.3°  114.4°  -27.0° -143.0°   88.3°  -79.0°   55.4°  -72.4° -154.4°   E10                                
H11     171.9°   33.9°  155.4°  -71.8° -113.8°   86.1° -142.2°   72.2°   24.7°  142.7°   H11                         
H12      78.5°  125.8°   93.3°  -35.8°  -56.4°  113.7°  -74.2°  160.7°   85.3° -114.0°  103.2°   H12                  
H13     129.6°  -34.3°  114.3°  117.3°  124.9°  -73.4°  123.4°  -31.2°  -69.2°   93.9°  -49.0° -151.9°   H13           
H14    -119.8°  -95.1° -131.0°   61.5°   51.4° -149.6°  -73.9° -106.0°   84.3° -111.5°  -68.3°   88.8°  -77.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4i4zb_ :   (VAL111)  (LYS263)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
 d3tlfd_ :   (LYS107)  (LYS262)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
 d4i42b_ :   (PRO121)  (GLU265)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3r9qb_ :    (LYS98)  (ALA237)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d3t88a_ :   (PRO121)  (ASN271)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d4fzwb_ :    (PRO94)  (LYS247)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4k3wb_ :   (VAL110)  (LYS263)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Marinobacter aquaeolei [TaxId: 351348]
 d4i4za_ :   (VAL111)  (LYS263)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
 d4fzwa_ :    (PRO94)  (LYS247)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4qiij_ :   (GLY156)  (LYS302)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d4i42c_ :   (PRO121)  (LYS273)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3swxb_ :    (LYS99)  (SER240)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 36809]
 d4i42a_ :   (PRO121)  (LYS273)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3qkaa_ :    (LYS94)  (ALA234)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14