Protein Concepts Dictionary

Tableau information

Concept source:  d1hh4a_  amino acid (a.a.) range (PRO1)(LEU177)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO1)   (ASP11) E1
	   (GLY15)   (ASN26) H2
	   (ASN39)   (MET45) E3
	   (ASN52)   (THR58) E4
	   (TYR64)   (PRO73) H5
	   (VAL77)   (SER83) E6
	   (PRO87)   (VAL93) H7
	   (TRP97)  (PRO106) H8
	  (PRO109)  (GLY114) E9
	  (LYS116)  (ASP122) H10
	  (ASP122)  (LYS133) H11
	  (TYR139)  (GLY150) H12
	  (TYR154)  (SER158) E13
	  (GLY164)  (LEU177) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      146.4°   H2                                                                                         
E3      127.1°   44.3°   E3                                                                                  
E4      -18.0° -152.7°  145.0°   E4                                                                           
H5     -159.0°   37.6°  -34.6° -169.6°   H5                                                                    
E6      -30.7°  115.7°  107.5°  -43.9°  141.1°   E6                                                             
H7      118.9°  -94.2°  -85.5°  110.6°  -60.8° -148.0°   H7                                                      
H8      148.2°  -64.9°  -76.8°  133.4°  -42.7°  174.5°  -34.0°   H8                                               
E9      -45.4°  101.0°   99.4°  -56.8°  130.0°  -15.0° -162.6°  163.5°   E9                                        
H10      38.2°  114.9°   89.8°   56.1° -124.1°   25.3° -131.7° -160.1°   32.6°   H10                                
H11      48.6° -163.1° -124.9°   44.1° -125.5°   78.5°  -70.3° -101.9°  -93.5°  -73.7°   H11                         
H12     113.2° -100.1° -102.2°  100.3°  -73.0°  143.7°   18.8°  -35.2°  156.9°  139.2°   67.4°   H12                  
E13     -78.8°   74.4°  103.5°  -78.4°  112.0°  -56.9°  149.7°  119.3°  -45.4°  -77.8°  122.4°  134.3°   E13           
H14     120.8°  -92.5°  -86.0°  111.7°  -60.0°  150.4°    3.0°  -31.3°  165.2°  134.7°  -72.3°  -17.2° -146.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4u5xa_ :     (THR8)  (LEU182)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Oryza sativa [TaxId: 39947]
 d4gzma_ :     (ILE4)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2rgnc1 :     (ILE4)  (GLN180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d1ds6a_ :     (MET1)  (PRO179)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rac |Human (Homo sapiens) [TaxId: 9606]
 d2odba_ :     (GLN2)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d3vhlb_ :     (LYS5)  (GLU178)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d1gwnc_ :    (LYS25)  (CYS197)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoE (RND3) |Mouse (Mus musculus) [TaxId: 10090]
 d3eg5a_ :     (LYS5)  (GLU178)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Mouse (Mus musculus) [TaxId: 10090]
 d4mitb_ :     (PRO8)  (ASN186)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Entamoeba histolytica [TaxId: 885315]
 d1doaa_ :     (MET1)  (GLU178)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d3th5a_ :     (LYS5)  (ALA175)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wmob_ :     (HIS0)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d2atxa1 :    (LEU16)  (LEU191)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoQ |Human (Homo sapiens) [TaxId: 9606]
 d3a58b_ :    (ARG11)  (MET185)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1i4dd_ :     (ILE4)  (ALA175)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rac |Human (Homo sapiens) [TaxId: 9606]
 d3sbda_ :     (GLY1)  (ALA175)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1cc0a_ :     (LYS6)  (LYS186)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d1hh4a_ :     (PRO1)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rac |Human (Homo sapiens) [TaxId: 9606]
 d2yinc_ :    (GLN-2)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4itrd_ :     (LYS5)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d1ftna_ :     (LYS6)  (GLN180)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d3a58f_ :    (ARG11)  (MET185)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37