Protein Concepts Dictionary

Tableau information

Concept source:  d2nqya_  amino acid (a.a.) range (GLY51)(GLY170)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY51)   (ASN55) E1
	   (THR59)   (GLY64) H2
	   (ASN65)   (TYR70) E3
	   (ASN73)   (SER77) E4
	   (ASN79)   (CYS83) E5
	   (CYS83)   (VAL89) E6
	   (VAL93)   (ASP99) E7
	   (ASP99)  (ASN103) E8
	  (GLY113)  (VAL117) E9
	  (GLY120)  (ASN131) E10
	  (PHE141)  (SER150) E11
	  (SER150)  (SER154) E12
	  (GLY155)  (SER160) E13
	  (SER160)  (GLY170) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      113.3°   H2                                                                                         
E3     -148.3°   77.6°   E3                                                                                  
E4      -87.0°  152.1°   75.4°   E4                                                                           
E5       68.2°  -53.1°  130.7°  153.6°   E5                                                                    
E6       -3.2°  116.3°  146.3°   83.8°   71.4°   E6                                                             
E7      162.8°  -57.1°  -47.9° -107.4°   96.0°  165.5°   E7                                                      
E8     -111.4°  126.4°   49.0°  -26.5°  178.5° -108.2°  -84.6°   E8                                               
E9      117.2°    7.2°  -71.0° -144.9°   59.9°  120.1°  -55.1° -119.6°   E9                                        
E10     -48.3°  130.1°  101.3°   50.6° -111.6°  -45.7°  148.8°   67.5°  127.3°   E10                                
E11     157.1°  -58.3°  -54.3° -109.3°   92.5°  159.4°   -6.8°  -88.2°  -57.2°  154.3°   E11                         
E12      87.2°   36.9°  -85.9°  133.0°   57.4°   89.4°   89.5° -121.3°   35.8°  -93.3°   92.6°   E12                  
E13     -17.0° -116.7°  161.2°   88.4°  -65.3°  -17.6°  149.5° -114.8°  122.4°  -60.4°  142.8°  -98.7°   E13           
H14     -56.0° -153.0°  125.4°  -54.4° -102.0°  -53.9°  125.1°  -78.7°  160.2°  -64.5°  120.5° -143.2°  -45.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1f5ja_ :    (ASN42)  (GLY166)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Dictyoglomus thermophilum [TaxId: 14]
 d4ixla_ :    (HIS43)  (GLY169)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |automated matches |Bacillus sp [TaxId: 1409]
 d1h4hd_ :    (GLY51)  (GLY170)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
 d1h4ga_ :    (GLY51)  (GLY170)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
 d1h4ha_ :    (GLY51)  (GLY170)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
 d1h4hb_ :    (GLY51)  (GLY170)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
 d1h4gb_ :    (GLY51)  (GLY170)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
 d2nqya_ :    (GLY51)  (GLY170)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |automated matches |Bacillus sp. [TaxId: 1409]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29