Protein Concepts Dictionary

Tableau information

Concept source:  d2w01b_  amino acid (a.a.) range (MET435)(GLN606)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEHEEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET435)  (PRO441) E1
	  (THR443)  (LEU449) E2
	  (GLY451)  (GLU457) H3
	  (ASN460)  (GLY483) H4
	  (GLY483)  (GLU488) E5
	  (ASP492)  (GLY499) E6
	  (ASP507)  (GLY533) H7
	  (PRO536)  (THR545) E8
	  (GLU547)  (ASN552) E9
	  (LYS560)  (ALA566) E10
	  (ALA566)  (SER576) H11
	  (GLY581)  (SER586) E12
	  (SER586)  (GLY594) H13
	  (GLY601)  (GLN606) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      -91.0°   E2                                                                                         
H3      119.1°   30.1°   H3                                                                                  
H4       71.7°  156.1°  152.0°   H4                                                                           
E5     -119.7°  -53.0°  -50.4°  150.3°   E5                                                                    
E6       83.2°  168.6°  150.0°  -13.4°  138.2°   E6                                                             
H7      -99.9°  -16.7°   19.4°  148.7°  -60.3°  156.0°   H7                                                      
E8      -90.6°  160.9° -149.4°  -40.0°  110.3°  -29.7°  168.5°   E8                                               
E9      153.8°   76.9°   46.9° -111.4°   71.3° -104.3°   63.3° -108.4°   E9                                        
E10     -48.0°  -98.6° -124.8°   82.3°  -87.1°   84.8° -115.1°   68.8°  156.0°   E10                                
H11      51.8°  -40.4°  -67.3°  117.9°  -86.5°  131.2°  -48.3°  141.5° -109.8°  -78.2°   H11                         
E12     -93.1°  148.2° -142.5°  -52.3°   98.3°  -42.5°  158.4°  -12.8°  109.5°   62.4°  139.9°   E12                  
H13      73.6° -121.8°  116.3°   38.4° -163.8°   47.2° -110.5°   76.9°  -92.8°  109.1°  -96.6°  -89.6°   H13           
E14    -126.9°   92.3°   83.7° -111.2°   39.2°  -99.0°   98.0°  -71.7°   77.5°  -79.2°  121.6°  -60.5° -141.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2w01d_ :   (GLY436)  (GLN606)   [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
 d2w01a_ :   (GLY436)  (GLN606)   [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
 d3uvjb_ :   (LYS415)  (HIS586)   [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2w01b_ :   (MET435)  (GLN606)   [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
 d3uvjd_ :   (LYS415)  (HIS586)   [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1azsa_ :   (GLN385)  (PRO544)   [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylyl cyclase VC1, domain C1a |Dog (Canis familiaris) [TaxId: 9615]
 d2w01c_ :   (MET435)  (GLN606)   [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58