Protein Concepts Dictionary

Tableau information

Concept source:  d3p8pa_  amino acid (a.a.) range (ASP130)(LYS267)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEHEHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP130)  (THR134) E1
	  (GLU137)  (SER143) E2
	  (ASN147)  (PHE158) H3
	  (ALA162)  (PRO167) E4
	  (HIS173)  (CYS178) H5
	  (ASN184)  (ILE188) E6
	  (SER191)  (SER205) H7
	  (ASP210)  (PRO215) E8
	  (ASP216)  (CYS222) H9
	  (CYS222)  (ASN226) E10
	  (GLY231)  (HIS236) E11
	  (TYR242)  (LYS253) H12
	  (MET256)  (SER261) E13
	  (MET262)  (LYS267) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      164.0°   E2                                                                                         
H3      -31.0°  164.5°   H3                                                                                  
E4      140.6°  -24.1°  164.6°   E4                                                                           
H5       48.6°  118.2°  -72.2°   94.5°   H5                                                                    
E6     -146.9°   19.1°  163.3°   -8.2°   99.2°   E6                                                             
H7      -51.0°  138.2°  -41.6°  152.4°  -99.0°  154.9°   H7                                                      
E8      139.6°  -30.8°  148.0°  -20.1°   91.2°  -15.3°  169.0°   E8                                               
H9       53.0° -142.8°   22.2° -161.1°   92.2° -153.1°   42.2°  142.3°   H9                                        
E10      32.7° -163.1°    2.8°  167.3°   74.8°  165.2°  -39.3°  150.0°  -20.3°   E10                                
E11    -153.8°   10.6°  170.4°  -13.5° -107.8°   -9.7°  145.5°  -24.1°  152.0°  170.8°   E11                         
H12      16.8°  177.0°  -16.1°  157.4°   63.8°  163.0°  -39.0°  152.0°  -37.0°  -17.1° -170.5°   H12                  
E13    -170.8°  -12.6°  152.2°  -32.8° -122.5°  -25.6°  138.1°  -31.4°  131.4°  151.2°  -20.6°  168.3°   E13           
H14    -140.1°  -44.0°  132.8°  -62.6° -147.1°  -61.4°   94.3°  -74.8°  117.2°  130.0°  -51.7°  133.1°  -48.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3p8pa_ :   (ASP130)  (LYS267)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ci5a_ :   (ASP129)  (LYS266)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d2c6za_ :   (ASP129)  (ASP268)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d2ci3a_ :   (ASP129)  (LYS266)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d2ci6a_ :   (ASP129)  (LYS266)   [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.126