Protein Concepts Dictionary

Tableau information

Concept source:  d1k7ga2  amino acid (a.a.) range (GLY39)(TYR258)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHEEEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY39)   (ASN43) E1
	   (LYS45)   (SER49) E2
	   (SER49)   (ARG59) H3
	   (LYS72)   (PHE80) E4
	   (GLY93)   (PHE97) E5
	   (ASN98)  (ALA116) H6
	  (ASN117)  (GLY125) E7
	  (ASN130)  (ARG138) E8
	  (GLN149)  (PRO155) E9
	  (SER163)  (ASN167) E10
	  (GLN170)  (ASN175) H11
	  (TYR181)  (GLY195) H12
	  (SER220)  (SER224) H13
	  (MET247)  (TYR258) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      129.9°   E2                                                                                         
H3      -72.1°  102.8°   H3                                                                                  
E4      -23.8° -114.0°   54.2°   E4                                                                           
E5      116.9°  -35.9° -135.4° -116.4°   E5                                                                    
H6      155.6°   66.1° -126.6° -179.1°  -63.1°   H6                                                             
E7      -51.8°   99.4°   29.7°  -29.0° -119.6°  151.8°   E7                                                      
E8      -21.3° -150.7°   69.1°  -38.0°  134.5°  141.8°  -59.2°   E8                                               
E9     -157.4°   49.8°  -85.8°  134.8°  -75.7°  -45.9°  106.0°  149.5°   E9                                        
E10      22.1° -134.0°   92.7°  -45.5°  107.7°  133.8°  -73.9°  -27.4°  176.2°   E10                                
H11     115.2°  -14.9° -102.1° -101.2°   33.4°   78.8°  -91.5° -136.4°  -64.1° -119.6°   H11                         
H12    -142.8°   71.5°  -73.4°  127.5°  -97.4°  -53.3°  100.0°  128.1°  -22.3°  154.0°  -85.3°   H12                  
H13    -123.2°   23.6°  -79.3° -101.4°  -58.8°  -79.0°  -80.0° -138.5°   45.1° -138.0°  -28.6°   62.2°   H13           
H14    -133.6°   54.3°  -63.3°  111.0°  -88.2°  -69.8°   82.1°  131.6°   23.9°  155.5°  -65.0°   27.5°  -37.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1go7p2 :    (GLY39)  (TYR258)   [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Erwinia chrysanthemi [TaxId: 556]
 d1k7ia2 :    (GLY39)  (TYR258)   [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Erwinia chrysanthemi [TaxId: 556]
 d1go8p2 :    (GLY39)  (TYR258)   [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Erwinia chrysanthemi [TaxId: 556]
 d1k7qa2 :    (GLY39)  (TYR258)   [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Erwinia chrysanthemi [TaxId: 556]
 d1k7ga2 :    (GLY39)  (TYR258)   [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Erwinia chrysanthemi [TaxId: 556]
 d3hbup1 :    (GLY39)  (TYR258)   [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Erwinia chrysanthemi [TaxId: 556]
 d3hb2p1 :    (GLY39)  (TYR258)   [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Erwinia chrysanthemi [TaxId: 556]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92