Protein Concepts Dictionary

Tableau information

Concept source:  d3rc6a_  amino acid (a.a.) range (VAL995)(PRO1115)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL995) (LEU1000) E1
	 (TYR1006) (ARG1011) E2
	 (GLU1013) (THR1022) H3
	 (GLY1023) (ASN1027) E4
	 (ASN1027) (GLY1031) E5
	 (GLN1034) (ALA1039) E6
	 (PHE1043) (ASN1049) E7
	 (GLY1050) (VAL1055) E8
	 (THR1061) (PRO1067) E9
	 (GLY1069) (TYR1075) E10
	 (ASP1081) (GLN1086) E11
	 (ARG1092) (THR1098) E12
	 (ASP1103) (THR1108) E13
	 (ALA1111) (PRO1115) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      163.0°   E2                                                                                         
H3      109.9°   62.4°   H3                                                                                  
E4      -47.0°  125.2°  131.6°   E4                                                                           
E5       23.8° -161.9° -100.5°   69.7°   E5                                                                    
E6      155.1°  -41.7°  -79.1°  142.1° -134.1°   E6                                                             
E7      -58.6°  106.2°   59.4°  -74.2°  -65.7°  138.0°   E7                                                      
E8      108.7°  -88.2° -104.6°  122.4°   91.1°  -46.5°  146.1°   E8                                               
E9      -84.9°   83.8°  108.8°  -42.1° -108.6°  114.9°  -76.2°  136.8°   E9                                        
E10      55.6° -130.8°  -77.3°  102.3°   32.6° -106.8°   72.2°  -75.3°  138.3°   E10                                
E11     -91.7°   72.5°   80.6°  -62.2° -112.1°  113.0°  -57.3°  155.1°  -28.4°  129.3°   E11                         
E12      51.5° -134.7°  -79.9°   98.2°   28.5° -110.5°  -70.7°   77.4° -134.6°    4.1° -127.4°   E12                  
E13     152.2°  -31.8°  -94.1°  106.4°  163.2°  -41.1°  129.9°  -77.1°   73.9° -147.8°   78.3° -151.3°   E13           
E14     -44.4°  143.6°  -89.1°  -90.3°  -20.7°  115.1°  -73.2°   77.2° -129.1°   13.1° -127.6°    9.5°  154.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3su4a_ :   (VAL995) (GLY1120)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3suga_ :   (VAL995) (PRO1115)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3rc6a_ :   (VAL995) (PRO1115)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Hepatitis c virus subtype 1a [TaxId: 31646]
 d4nwka_ :    (VAL-5)  (ARG117)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3suea_ :   (VAL995) (PRO1115)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47