Tableau information
Concept source: d1j9aa_ amino acid (a.a.) range (ASN10)(GLU179)
nSSEs in this Concept: 14
String of secondary struct.elems. (SSEs) defining this concept: EEEHHHHEHHEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN10) (LEU16) E1
(ILE29) (VAL35) E2
(LEU43) (SER54) E3
(SER54) (LYS60) H4
(ASN62) (GLY73) H5
(LEU74) (SER81) H6
(THR84) (VAL100) H7
(ALA104) (ASN110) E8
(ILE112) (TYR122) H9
(MSE123) (TYR129) H10
(TYR132) (VAL137) E11
(SER138) (LYS148) H12
(PRO149) (PHE155) H13
(ALA163) (GLU179) H14
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.7° E2
E3 -24.2° 171.6° E3
H4 -86.6° 82.8° -99.3° H4
H5 -109.8° 65.1° -120.1° -117.7° H5
H6 -92.2° 102.5° -72.3° 155.5° -85.7° H6
H7 161.5° 3.1° -172.0° -79.7° 66.8° 105.4° H7
E8 -43.2° 120.6° -66.6° -56.1° 95.9° -133.1° 118.3° E8
H9 81.6° -113.0° 62.0° 153.0° -89.2° -10.6° -115.9° 122.8° H9
H10 -146.0° 24.2° -154.4° -59.7° 84.6° 120.2° 21.2° -106.6° -130.6° H10
E11 -78.7° 85.0° -102.8° -52.6° 71.8° 150.8° 83.0° -36.8° 145.8° 76.9° E11
H12 -93.3° 75.1° -107.5° -8.8° 110.0° -160.4° 72.0° -59.0° -160.7° -52.7° -48.8° H12
H13 -65.4° 111.3° -74.2° -125.1° 46.2° 75.6° 112.9° -72.5° 71.1° 128.9° 75.3° -123.6° H13
H14 129.4° -44.0° 134.1° 43.8° 103.7° -127.6° -41.3° 97.6° -136.2° -20.3° 77.1° 38.9° 144.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2gbza_ : (ASP9) (MET181) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Xanthomonas campestris pv. campestris [TaxId: 340]
d3tr8a_ : (ASN7) (LEU179) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Coxiella burnetii [TaxId: 777]
d2igia_ : (ASN6) (GLU175) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Oligoribonuclease |Escherichia coli [TaxId: 562]
d2igib_ : (ASN6) (ILE178) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Oligoribonuclease |Escherichia coli [TaxId: 562]
d1ytaa1 : (ASN6) (GLU175) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Oligoribonuclease |Escherichia coli [TaxId: 562]
d1j9aa_ : (ASN10) (GLU179) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Oligoribonuclease |Haemophilus influenzae [TaxId: 727]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.55