Protein Concepts Dictionary

Tableau information

Concept source:  d2w8pa_  amino acid (a.a.) range (TYR175)(LEU368)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR175)  (THR181) E1
	  (ASP185)  (PRO194) E2
	  (ALA198)  (TRP204) E3
	  (PHE206)  (GLY222) H4
	  (GLY222)  (ALA230) E5
	  (PHE235)  (GLY248) H6
	  (VAL253)  (CYS259) E7
	  (SER260)  (CYS272) H8
	  (SER278)  (THR283) E9
	  (THR286)  (VAL300) H10
	  (VAL303)  (VAL315) E11
	  (VAL321)  (PHE333) H12
	  (ASN344)  (GLN349) E13
	  (HIS353)  (LEU368) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      156.5°   E2                                                                                         
E3      129.0°  -40.0°   E3                                                                                  
H4      -48.8° -148.6°  165.6°   H4                                                                           
E5      125.7°  -31.6°  -31.9°  162.3°   E5                                                                    
H6      -82.7° -119.9°  133.8°  -37.8° -151.5°   H6                                                             
E7      114.3°  -42.2°  -46.8°  146.8°  -15.9° -157.4°   E7                                                      
H8      -31.7°  166.7° -152.9°   18.4° -156.3°   51.3°  142.1°   H8                                               
E9      120.9°  -51.1°  -11.7°  154.5°  -42.1°  129.5°  -55.9° -141.5°   E9                                        
H10     -53.0°  135.5°  174.1°  -20.3°  142.3°  -50.1°  127.6°  -31.9° -173.3°   H10                                
E11      98.1°  -76.1°  -36.3°  131.6°  -62.2°  121.9°  -72.4° -116.6°  -25.0° -148.3°   E11                         
H12    -104.4°   74.0° -112.2°  -80.6°  -85.7°  -84.3°  -77.2°   94.2° -123.9°   62.4° -147.6°   H12                  
E13      64.4° -111.1°  -71.1°   98.5°  -91.5°  105.2°   96.0°  -81.9°  -60.1° -113.2°  -35.2°  163.5°   E13           
H14    -143.1°  -53.7°  -87.9°   95.9°  -84.2°   68.8°  -89.4°  114.2°  -95.6°   90.3°  116.5°  -51.6°  144.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3v9jb_ :   (PRO185)  (ARG374)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4i3xc_ :   (GLU126)  (ALA304)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4fr8g_ :   (HIS140)  (ARG329)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4i3ua_ :   (ILE121)  (LEU318)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d3qanc_ :   (ILE157)  (LEU347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3qanb_ :   (ILE157)  (LEU347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3v9ja_ :   (PRO185)  (ILE375)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3prla_ :   (ASN128)  (LEU320)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3qana_ :   (ILE157)  (LEU347)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d4gnza_ :   (ILE540)  (MET734)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4i3xb_ :   (ILE121)  (ALA304)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d2w8pa_ :   (TYR175)  (LEU368)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4h80a_ :    (ALA82)  (GLN256)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rh9a_ :   (PRO131)  (LYS314)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Marinobacter aquaeolei [TaxId: 351348]
 d3k2wc_ :   (ILE126)  (GLY315)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
 d4u3wb_ :   (GLY132)  (LEU324)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d2w8na_ :   (TYR175)  (LYS366)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3szaa_ :    (ALA82)  (GLN256)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4i3ta_ :   (GLU126)  (ALA304)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d3v9ha_ :   (PRO185)  (ILE375)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4fr8c_ :   (HIS140)  (TYR315)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4i3xa_ :   (GLY125)  (ALA304)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4lgza_ :   (PRO185)  (ILE375)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82