Protein Concepts Dictionary

Tableau information

Concept source:  d2wrdb1  amino acid (a.a.) range (ASN149)(THR318)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN149)  (LYS155) E1
	  (SER158)  (ASN168) E2
	  (MET175)  (ILE185) E3
	  (ASP186)  (THR192) H4
	  (TYR200)  (SER206) E5
	  (THR207)  (THR218) E6
	  (GLY226)  (MET238) E7
	  (THR241)  (THR247) E8
	  (ASN249)  (LYS261) E9
	  (GLY263)  (LYS269) E10
	  (LYS280)  (PRO284) E11
	  (GLY286)  (THR290) E12
	  (PRO293)  (VAL297) E13
	  (GLU312)  (THR318) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2     -146.7°   E2                                                                                         
E3      -40.8° -161.7°   E3                                                                                  
H4      -98.1°   69.9°  128.3°   H4                                                                           
E5      135.3°  -12.2° -165.3°   62.3°   E5                                                                    
E6      -61.3°  151.0°  -24.5°  124.5°  163.1°   E6                                                             
E7      121.4°  -27.4°  159.6°  -52.5°   15.2° -175.4°   E7                                                      
E8      -34.3°  172.9°   11.4° -116.9°  169.0°  -27.1°  155.6°   E8                                               
E9      159.1°   12.4°  156.5°   73.1°  -23.9°  139.3°  -38.4°  165.8°   E9                                        
E10     -81.7°  131.2°  -44.3°  122.9°  143.0°  -20.5°  156.0°  -47.6°  119.1°   E10                                
E11     -56.3° -153.1°  -16.5°  131.2° -164.6°    9.7° -174.9°   22.7°  143.1°   27.9°   E11                         
E12     138.9°  -15.4°  147.7°  -82.4°  -20.1°  147.9°  -32.8°  157.9°  -23.5°  132.3°  145.3°   E12                  
E13     -57.8°  154.2°  -34.1°  104.9°  160.4°  -19.6°  157.3°  -29.1°  142.3°  -30.1°  -26.9°  161.7°   E13           
E14     153.7°    7.1°  158.0°  -73.2°   19.2° -143.9°   34.2°  168.9°   -5.7° -124.1° -146.8°   18.3° -148.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4m4ye_ :   (ASN150)  (THR318)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wr0c1 :   (ASN149)  (THR318)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Unidentified influenza virus [TaxId: 11309]
 d2wrec1 :   (ASN149)  (ALA317)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d3qqoa_ :   (ASN150)  (THR318)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4jula_ :   (ASN150)  (THR318)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4ktha_ :   (ASN146)  (GLY316)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wrda1 :   (ASN149)  (THR318)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d2wrfa1 :   (ASN149)  (LYS310)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/chicken/potsdam/4705/1984(h2n2)) [TaxId: 139280]
 d3s11c_ :   (ASN150)  (THR318)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
 d4kthc_ :   (ASN146)  (GLY316)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d1jsma_ :   (ASN146)  (THR315)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wr7b1 :   (ASN149)  (THR318)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/singapore/1/1957(h2n2)) [TaxId: 382781]
 d4juma_ :   (ASN150)  (THR318)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4jule_ :   (ASN150)  (THR318)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wr0a1 :   (ASN149)  (THR318)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Unidentified influenza virus [TaxId: 11309]
 d1ru7a_ :   (ASN150)  (THR319)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wrdc1 :   (ASN149)  (GLY319)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d2wreb1 :   (ASN149)  (ALA317)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d2rfta_ :   (THR155)  (ALA329)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza b virus (strain b/hong kong/8/73) [TaxId: 11531]
 d2wrhh_ :   (ASN150)  (ARG327)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/mallard/alberta/35/1976(h1n1)) [TaxId: 352520]
 d2wrba1 :   (ASN149)  (GLY319)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza A virus [TaxId: 11320]
 d4cqwa_ :   (ASN145)  (THR314)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/turkey/turkey/1/2005(h5n1)) [TaxId: 375457]
 d4cqxc_ :   (ASN145)  (THR314)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/turkey/turkey/1/2005(h5n1)) [TaxId: 375457]
 d2wr0b1 :   (ASN149)  (THR318)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Unidentified influenza virus [TaxId: 11309]
 d2wr7c1 :   (ASN149)  (THR318)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/singapore/1/1957(h2n2)) [TaxId: 382781]
 d4cqva_ :   (ASN145)  (THR314)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/turkey/turkey/1/2005(h5n1)) [TaxId: 375457]
 d4juka_ :   (ASN150)  (THR318)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d3ku3a_ :   (ASN150)  (THR290)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2wrdb1 :   (ASN149)  (THR318)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza a virus (a/japan/305+/1957(h2n2)) [TaxId: 382813]
 d4i78a_ :   (ASN150)  (ALA317)   [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza A virus [TaxId: 1129347]
 d4edac_ :   (ASN147)  (GLY301)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.19