Tableau information
Concept source: d3ktza_ amino acid (a.a.) range (VAL52)(ALA232)
nSSEs in this Concept: 14
String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHHHHHHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL52) (ASN58) E1
(GLN62) (ALA67) E2
(VAL76) (ARG81) E3
(ASN82) (PHE87) E4
(PRO91) (GLY97) H5
(ILE103) (PHE109) E6
(SER112) (GLY118) H7
(ILE130) (ALA144) H8
(LYS149) (PHE170) H9
(PHE170) (ASN180) H10
(ALA188) (LYS197) H11
(LYS197) (SER208) H12
(SER215) (GLU221) E13
(LYS226) (ALA232) E14
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 164.8° E2
E3 -47.3° 147.8° E3
E4 114.1° -50.7° 159.1° E4
H5 -58.4° 136.8° -15.5° 172.2° H5
E6 90.6° -74.2° 137.2° -23.8° 148.5° E6
H7 -37.0° 142.1° -49.6° 110.4° -65.2° 93.8° H7
H8 -98.6° 89.8° -68.5° 111.7° -72.9° 121.3° 65.5° H8
H9 119.3° -60.1° 119.2° -76.5° 105.1° -84.7° -156.3° -134.5° H9
H10 13.8° -171.5° -37.8° 125.9° -46.4° 102.1° 44.8° -98.7° -112.3° H10
H11 -152.2° 41.1° 107.3° -88.1° 99.7° -111.6° 121.3° -56.0° 80.7° -145.1° H11
H12 141.6° -40.3° 127.5° -72.4° 112.0° -88.6° 177.1° -114.4° 22.5° 133.1° -58.9° H12
E13 -8.5° 163.2° -46.1° 113.9° -59.0° 91.1° 28.5° 91.1° -127.8° -19.4° 146.2° -150.0° E13
E14 144.1° -47.7° 106.7° -94.2° 92.0° -114.3° 150.2° -90.2° 44.3° 130.4° -40.4° -28.1° 149.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ctka1 : (VAL48) (ASN232) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Bouganin |Bougainvillea (Bougainvillea spectabilis) [TaxId: 146096]
d1rzoc_ : (ILE1058) (TYR1242) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ricin A-chain |Castor bean (Ricinus communis) [TaxId: 3988]
d3o5wa_ : (VAL54) (THR231) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d3mvga_ : (ASP48) (ASP234) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Iris hollandica [TaxId: 35876]
d3mvgb_ : (SER45) (ASP234) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Iris hollandica [TaxId: 35876]
d3mrya_ : (LEU48) (ASN227) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Momordica balsamina [TaxId: 3672]
d1hwoa_ : (VAL55) (ASN232) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ebulin A-chain |Sambucus ebulus [TaxId: 28503]
d1d8va_ : (ILE48) (ASN225) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Beta-momorcharin |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1j1ma_ : (ARG56) (ASP244) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ricin A-chain |Castor bean (Ricinus communis) [TaxId: 3988]
d1lp8a_ : (LYS50) (GLN238) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Dianthin 30 |Clove pink (Dianthus caryophyllus) [TaxId: 3570]
d1hwma_ : (VAL55) (ASN232) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ebulin A-chain |Sambucus ebulus [TaxId: 28503]
d1cf5a_ : (ARG46) (ASN225) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Beta-momorcharin |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1mrja_ : (ARG46) (ASN227) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Trichosanthin |Mongolian snake gourd (Trichosanthes kirilowii Maxim.) [TaxId: 3677]
d3my6a_ : (ARG46) (ASN227) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Momordica balsamina [TaxId: 3672]
d1puma_ : (VAL54) (THR231) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d1hwna_ : (VAL55) (ASP231) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ebulin A-chain |Sambucus ebulus [TaxId: 28503]
d1rzoa_ : (ILE1058) (TYR1242) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ricin A-chain |Castor bean (Ricinus communis) [TaxId: 3988]
d3ej5x_ : (ARG56) (TYR243) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
d1mrga_ : (LEU48) (ASN227) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Momorcharin (momordin) |Bitter gourd (Momordica charantia) [TaxId: 3673]
d3ktza_ : (VAL52) (ALA232) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Gelonium multiflorum [TaxId: 3979]
d1nioa_ : (ILE49) (ASP227) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Beta-luffin |Smooth loofah (Luffa cylindrica) [TaxId: 3670]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.165