Protein Concepts Dictionary

Tableau information

Concept source:  d2qina_  amino acid (a.a.) range (ALA43)(ALA219)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA43)   (ALA49) E1
	   (HIS51)   (THR57) E2
	   (THR69)   (THR75) E3
	   (GLY79)   (ASP84) E4
	   (PRO89)  (GLY103) H5
	  (ARG110)  (HIS116) E6
	  (VAL125)  (ARG131) H7
	  (GLY133)  (ASN139) E8
	  (ASN139)  (GLY149) H9
	  (ARG172)  (ASP176) E10
	  (GLU178)  (GLY183) E11
	  (ILE185)  (PHE191) E12
	  (SER200)  (ASN210) E13
	  (PRO213)  (ALA219) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      149.2°   E2                                                                                         
E3      -58.9°  149.6°   E3                                                                                  
E4      109.7°  -40.5°  167.8°   E4                                                                           
H5      -63.8°  143.7°  -34.2°  148.1°   H5                                                                    
E6       89.5°  -60.9°  148.4°  -20.3°  135.6°   E6                                                             
H7      -89.2°  119.9°  -30.3°  160.3°  -45.9° -176.8°   H7                                                      
E8       58.9°  -90.3°  115.7°  -52.1°  119.2°  -33.8° -143.8°   E8                                               
H9     -171.5°   35.3° -115.1°   75.8° -115.2°   96.1°  -84.9°  124.5°   H9                                        
E10      50.2° -103.9°  106.5°  -64.2°   93.6°  -44.6°  135.4°  -32.1°  137.3°   E10                                
E11    -103.3°  105.8°  -56.4° -134.8°  -39.6° -143.9°   39.4° -155.2°   75.7° -123.5°   E11                         
E12      94.5°  -55.5° -141.9°   28.1°  156.4°   27.5° -149.8°  -37.4°   87.6°  -63.9°  160.8°   E12                  
E13     -75.9° -126.9°   53.2° -131.5°   19.6° -125.3°   57.1°  121.9° -105.7°   91.1°  -33.4°  152.5°   E13           
E14     124.6°   30.4° -142.8°   38.0° -170.3°  -52.9° -125.9°  -70.5°   55.7°  -95.8°  131.4°  -33.3°  157.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1vmea2 :     (PRO2)  (CYS167)   [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |ROO-like flavoprotein TM0755, N-terminal domain |Thermotoga maritima [TaxId: 2336]
 d4awzc_ :    (MET43)  (SER221)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1smla_ :    (ALA22)  (TYR182)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Xanthomonas maltophilia [TaxId: 40324]
 d4dikb1 :     (PRO2)  (CYS167)   [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |automated matches |Thermotoga maritima [TaxId: 2336]
 d2qinb_ :    (ALA43)  (ALA219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Xanthomonas maltophilia [TaxId: 40324]
 d4dila1 :     (PRO2)  (CYS167)   [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |automated matches |Thermotoga maritima [TaxId: 2336]
 d2qina_ :    (ALA43)  (ALA219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Xanthomonas maltophilia [TaxId: 40324]
 d2qinc_ :    (ALA43)  (ALA219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Xanthomonas maltophilia [TaxId: 40324]
 d2qjsa_ :    (ALA26)  (ALA224)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Xanthomonas maltophilia [TaxId: 40324]
 d4d02a1 :     (SER2)  (ASN165)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d4dika1 :     (PRO2)  (CYS167)   [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |automated matches |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157