Tableau information
Concept source: d1onka_ amino acid (a.a.) range (VAL54)(LEU240)
nSSEs in this Concept: 14
String of secondary struct.elems. (SSEs) defining this concept: EEEEEHHHHHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL54) (ASN60) E1
(ASP64) (ALA69) E2
(VAL78) (GLY83) E3
(ASP84) (LEU89) E4
(THR105) (PHE111) E5
(PRO116) (ALA122) H6
(GLY131) (PHE144) H7
(SER148) (PHE169) H8
(PHE169) (GLY183) H9
(ASP189) (THR197) H10
(SER198) (SER209) H11
(ASN215) (ALA221) E12
(GLY225) (THR231) E13
(ASN232) (LEU240) H14
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.5° E2
E3 -44.8° 149.3° E3
E4 120.0° -45.6° 162.8° E4
E5 94.7° -70.9° 139.2° -25.6° E5
H6 -22.0° 157.9° -38.6° 124.2° 102.4° H6
H7 -99.7° 88.9° -67.8° 114.1° 127.7° 78.7° H7
H8 116.9° -63.0° 118.2° -74.1° -80.8° -138.0° -132.2° H8
H9 18.4° -175.3° -28.0° 138.1° 112.6° 26.1° -91.2° -113.8° H9
H10 -148.5° 43.6° 106.3° -85.7° -110.9° 128.8° -50.2° 86.1° -134.3° H10
H11 144.3° -37.4° 131.8° -64.7° -82.2° 164.6° -110.3° 27.4° -138.6° -60.7° H11
E12 -11.4° 156.4° -51.5° 112.1° 87.8° -18.8° 96.9° -124.6° -28.1° 147.2° -151.5° E12
E13 147.0° -45.9° 107.6° -89.4° -112.3° 145.2° -79.0° 53.5° 129.5° -35.2° -34.1° 157.6° E13
H14 46.3° -147.8° 1.5° 164.0° 140.7° 39.9° -66.8° -117.9° 29.5° -104.9° -130.9° 53.0° -106.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3d7wa_ : (VAL54) (LEU240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d1pc8a_ : (VAL53) (VAL229) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d2rg9a_ : (VAL54) (LEU240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d4jkxa_ : (VAL54) (LEU240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d1onka_ : (VAL54) (LEU240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.165