Tableau information
Concept source: d1xj5a_ amino acid (a.a.) range (GLY46)(SER202)
nSSEs in this Concept: 14
String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEHEHHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY46) (SER52) E1
(ALA59) (LYS63) E2
(LEU68) (LYS72) E3
(GLN76) (PHE81) E4
(GLY87) (LEU92) E5
(THR99) (ILE118) H6
(LYS122) (GLY128) E7
(GLY132) (ALA139) H8
(GLU145) (GLU151) E9
(LYS154) (PHE164) H10
(PHE164) (ASP173) H11
(ARG175) (ILE180) E12
(GLY183) (ALA190) H13
(ASP196) (SER202) E14
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 157.2° E2
E3 36.8° -139.6° E3
E4 -146.8° 41.9° -171.7° E4
E5 40.0° -136.6° 3.3° 170.2° E5
H6 35.9° -123.6° 64.4° -122.8° 66.7° H6
E7 104.9° -92.9° -78.0° 94.0° -76.3° 140.4° E7
H8 -81.9° 84.0° 113.0° -74.6° -115.1° -48.7° 166.1° H8
E9 95.6° -100.3° -67.3° -104.8° 65.5° 130.4° -10.8° 172.9° E9
H10 -141.9° 40.9° -178.4° 9.7° 177.5° -114.0° 103.5° -65.5° 114.3° H10
H11 53.8° -103.6° 60.5° -127.6° -61.1° 32.8° -132.5° 61.3° -122.4° -118.1° H11
E12 85.3° -107.2° 54.1° -118.2° 52.0° 118.2° -24.8° 166.9° -14.1° -127.5° -108.4° E12
H13 -48.8° 109.8° 71.9° -116.1° -73.7° -14.3° -149.9° -42.0° 139.2° -106.5° 24.5° 125.6° H13
E14 115.4° -84.4° -90.7° 81.3° -89.0° 151.3° -12.8° 154.1° -23.6° 90.9° -144.3° -37.5° -162.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2o06a_ : (TRP20) (SER174) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Human (Homo sapiens) [TaxId: 9606]
d2e5wa_ : (PHE6) (SER162) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1xj5a_ : (GLY46) (SER202) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2o06b_ : (TRP20) (SER174) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Human (Homo sapiens) [TaxId: 9606]
d2o05a1 : (GLY19) (SER174) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Human (Homo sapiens) [TaxId: 9606]
d2zsub_ : (PHE6) (SER162) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1iy9a_ : (SER2) (ASP156) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Bacillus subtilis [TaxId: 1423]
d1inlc_ : (TRP18) (SER171) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Thermotoga maritima [TaxId: 2336]
d2o07b_ : (TRP20) (SER174) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Human (Homo sapiens) [TaxId: 9606]
d1jq3a_ : (TRP18) (SER171) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Thermotoga maritima [TaxId: 2336]
d2zsue_ : (GLU5) (SER162) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |automated matches |Pyrococcus horikoshii [TaxId: 53953]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.66