Protein Concepts Dictionary

Tableau information

Concept source:  d3zf2a_  amino acid (a.a.) range (LEU4)(GLU146)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU4)   (SER10) E1
	   (ASN12)   (ARG18) E2
	   (ASP27)   (GLU32) E3
	   (VAL34)   (PRO38) E4
	   (LYS41)   (ASP47) E5
	   (ASP47)   (SER51) E6
	   (GLY55)   (THR61) E7
	   (ARG63)   (LYS69) H8
	   (HIS71)   (ALA81) E9
	   (ASN86)   (GLU96) E10
	  (ILE103)  (ILE108) E11
	  (GLU111)  (LYS116) E12
	  (GLY124)  (LYS130) E13
	  (ILE134)  (GLU146) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      157.5°   E2                                                                                         
E3       20.7° -168.0°   E3                                                                                  
E4       94.3°  -75.9°   92.1°   E4                                                                           
E5     -101.2°  -86.5°  105.5° -162.2°   E5                                                                    
E6      156.8°  -45.7° -138.0°  -96.5°   72.3°   E6                                                             
E7      -46.1°  111.7°  -62.5°  -67.4°  118.4°  156.5°   E7                                                      
H8       56.5°  110.0°   58.7°  -38.1°  154.5° -133.2°   38.1°   H8                                               
E9      121.5°  -79.9°  107.6°  124.8°  -52.6°  -36.9°  166.0° -147.1°   E9                                        
E10     -73.6°   88.6°  -81.0°  -31.4°  148.0°  123.7°  -36.7°  -24.2°  156.1°   E10                                
E11    -157.3°  -40.9°  147.5°  107.7°  -58.1°   18.4°  148.9°  145.8°  -40.0°  128.6°   E11                         
E12     -23.2°  152.2°  -35.5° -116.9°   78.1°  143.8°  -58.6°  -78.7°  107.5°  -92.4°  135.4°   E12                  
E13     -99.6°   92.4°  -99.4°  165.4°   12.8°   69.0°  126.0°  156.1°  -42.9°  159.8°  -58.1°   77.4°   E13           
E14     133.4°  -66.4°  112.7°   82.9°  -92.4°  -29.5°  149.2° -111.8°  -41.9°  114.3°   47.6° -136.5°  -84.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3zf2a_ :     (LEU4)  (GLU146)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 53369]
 d3zf3a_ :     (LEU5)  (GLU147)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 53369]
 d3zf6a_ :     (LEU5)  (GLU147)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 53369]
 d3zf1a_ :     (LEU5)  (GLU147)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 53369]
 d4gv8a_ :     (LEU5)  (GLU146)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 12360]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.85