Protein Concepts Dictionary

Tableau information

Concept source:  d1p01a_  amino acid (a.a.) range (ILE29)(ARG192)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE29)   (ASN34) E1
	   (SER40)   (PHE46) E2
	   (PHE46)   (GLY48) E3
	   (LYS50)   (ALA55) E4
	   (ALA65)   (ILE80) E5
	   (ALA89)   (PHE94) E6
	  (ASP102)  (LEU108) E7
	  (SER120)  (GLY126) E8
	  (ALA134)  (GLY140) E9
	  (GLY156)  (GLY160) E10
	  (VAL167)  (TYR171) E11
	  (GLY175)  (GLY179) E12
	  (GLY179)  (ASN184) E13
	  (ALA190)  (ARG192) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      134.0°   E2                                                                                         
E3       67.8°   67.7°   E3                                                                                  
E4      -82.7°  120.7°  132.2°   E4                                                                           
E5      141.0°  -72.9° -118.0°  108.8°   E5                                                                    
E6      -90.2°  110.0°  130.0°  -10.7°  107.4°   E6                                                             
E7       88.9°  -80.5°  -62.3°  156.5°  -65.5° -165.7°   E7                                                      
E8      -79.0°  -60.6°  -43.0°   96.5° -133.5°   90.4° -103.4°   E8                                               
E9      -50.3°  133.0°  -83.3° -106.2°   90.9° -117.0°   52.9° -119.2°   E9                                        
E10     116.0°  -61.8°   99.7°   60.0° -101.4°   49.4° -142.2°   58.5°  163.8°   E10                                
E11     -37.0° -154.3°  -92.3°   84.5°  105.4°  -95.1°   75.8° -115.6°  -23.0°  140.9°   E11                         
E12     150.7°   17.6°   85.3° -109.4°  -61.9°   99.2°  -88.4°   73.2°  140.5°  -55.7°  163.2°   E12                  
E13    -128.3°   96.7°  149.9°  -77.8°   32.4°  -78.8°   90.6°  150.0°  -90.5°   94.3°   93.4°  -80.9°   E13           
E14     -28.4° -143.1°  -78.7°  -92.9°  112.6° -103.0°   70.4° -104.1°   22.5° -142.3°  -13.6°  157.7° -105.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3m7ta_ :     (ILE7)  (ARG140)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]
 d3urca_ :    (ILE31)  (ARG192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d1p01a_ :    (ILE29)  (ARG192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d1gbaa_ :    (ILE31)  (ARG192)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d3urda_ :     (ILE7)  (ARG140)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
 d3m7ua_ :     (ILE7)  (ARG140)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |automated matches |Lysobacter enzymogenes [TaxId: 69]
 d1qq4a_ :     (ILE7)  (ARG140)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47