Protein Concepts Dictionary

Tableau information

Concept source:  d1w8ta_  amino acid (a.a.) range (THR6)(THR134)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR6)   (PHE11) E1
	   (GLY20)   (TRP26) E2
	   (THR29)   (TYR33) E3
	   (MET37)   (GLU43) E4
	   (ALA48)   (ARG53) E5
	   (GLY61)   (ASP66) E6
	   (ASP66)   (GLU70) E7
	   (LYS72)   (VAL77) E8
	   (ASP83)   (GLU87) E9
	   (GLU89)   (PRO93) E10
	   (GLU96)  (ASP107) E11
	  (ASP111)  (PHE115) E12
	  (ASP123)  (ASN129) E13
	  (ASN129)  (THR134) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
E2      -65.3°   E2                                                                                         
E3      -89.0°  131.0°   E3                                                                                  
E4       69.9°  -17.0°  147.4°   E4                                                                           
E5      128.3°  155.0°  -73.5°  139.1°   E5                                                                    
E6      -27.9°  -77.5°   64.1°  -88.4°  124.9°   E6                                                             
E7       47.8°  -17.5°  122.7°  -26.2°  159.8°   62.5°   E7                                                      
E8      132.3°  130.7°  -97.8°  114.8°  -24.4°  142.7°  138.1°   E8                                               
E9      -86.4°  -79.9°   56.3°  -96.5°  118.7°  -62.7°  -81.5°  135.8°   E9                                        
E10     -30.7°  -70.8°   67.2°  -83.2°  132.6°   -8.9°  -57.0°  151.6°  -56.6°   E10                                
E11     137.7°   93.7° -129.1°   80.6°  -62.0°  165.6°  106.7°  -39.8°  127.5° -163.6°   E11                         
E12     -47.3°  -50.4°   81.2°  -66.2°  154.6°  -36.4°  -42.7° -178.9°  -44.0°  -27.5°  141.2°   E12                  
E13    -126.6°  166.8°  -50.6°  160.8°  -24.9°  110.6°  173.0°  -48.0°   94.4°  116.0°  -80.3°  131.2°   E13           
E14     160.6°  103.5° -109.7°   94.9°  -56.6°  170.3° -119.8°  -42.7°  107.8°  163.7°  -23.3°  138.1°   66.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1w8wa_ :     (ARG4)  (THR134)   [view usage] : b.18.1.19 |Galactose-binding domain-like |Galactose-binding domain-like |Family 29 carbohydrate binding module, CBM29 |automated matches |Piromyces equi [TaxId: 99929]
 d1w9fa_ :     (THR6)  (THR134)   [view usage] : b.18.1.19 |Galactose-binding domain-like |Galactose-binding domain-like |Family 29 carbohydrate binding module, CBM29 |automated matches |Piromyces equi [TaxId: 99929]
 d1gwma_ :     (THR6)  (THR134)   [view usage] : b.18.1.19 |Galactose-binding domain-like |Galactose-binding domain-like |Family 29 carbohydrate binding module, CBM29 |Non-catalytic protein 1, Ncp1 |Piromyces equi [TaxId: 99929]
 d1gwkb_ :     (THR6)  (THR134)   [view usage] : b.18.1.19 |Galactose-binding domain-like |Galactose-binding domain-like |Family 29 carbohydrate binding module, CBM29 |Non-catalytic protein 1, Ncp1 |Piromyces equi [TaxId: 99929]
 d1w8ta_ :     (THR6)  (THR134)   [view usage] : b.18.1.19 |Galactose-binding domain-like |Galactose-binding domain-like |Family 29 carbohydrate binding module, CBM29 |automated matches |Piromyces equi [TaxId: 99929]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.18