Protein Concepts Dictionary

Tableau information

Concept source:  d1o1ra_  amino acid (a.a.) range (ARG69)(LEU284)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG69)   (ALA73) H1
	   (SER93)  (ASP110) H2
	  (SER113)  (ASN127) H3
	  (TYR131)  (GLN145) H4
	  (LEU148)  (GLN162) H5
	  (GLN167)  (TRP178) H6
	  (PRO182)  (GLU185) H7
	  (GLU185)  (ASP196) H8
	  (ASN199)  (ARG214) H9
	  (TRP216)  (ASP230) H10
	  (ASN234)  (THR248) H11
	  (ARG253)  (LEU269) H12
	  (GLU274)  (LEU284) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2       39.5°   H2                                                                                  
H3     -127.4° -137.1°   H3                                                                           
H4       77.6°   52.2° -151.7°   H4                                                                    
H5     -120.9° -143.9°  -15.8°  161.3°   H5                                                             
H6       75.2°   39.7° -140.3°  -21.7° -156.0°   H6                                                      
H7     -151.2° -138.7°  -26.1°  126.0°  -37.8° -119.8°   H7                                               
H8     -120.7° -152.4°  -27.7°  155.3°  -13.0° -163.6°  -44.4°   H8                                        
H9       71.7°   32.5°  130.2°  -37.3° -145.5°  -15.8° -115.5° -157.7°   H9                                 
H10    -130.2° -164.4°  -32.4°  143.4°  -21.8°  154.3°   40.9°  -12.1° -156.1°   H10                         
H11      66.3°   27.1°  124.0°  -48.3°  138.1°  -27.3° -114.7° -151.0°  -11.9° -154.9°   H11                  
H12    -125.1° -164.5°  -48.5°  132.3°  -36.6°  150.2°   54.3°  -24.3°  161.7°   16.2°  168.3°   H12           
H13      56.7°  -28.1°  110.2°  -70.2°  120.6°  -50.4° -111.7°  132.7°  -35.4° -142.0°  -23.6° -157.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fppa_ :    (SER93)  (LEU284)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2zira_ :    (ARG69)  (GLY288)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1o1ra_ :    (ARG69)  (LEU284)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1n95a_ :    (ARG69)  (LEU284)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2beda_ :    (GLU94)  (GLY288)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4gtma_ :    (ARG69)  (GLY288)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1d8da_ :    (ARG69)  (LEU284)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4gtoa_ :    (SER93)  (GLY288)   [view usage] : a.118.6.1 |alpha-alpha superhelix |Protein prenylyltransferase |Protein prenylyltransferase |Protein farnesyltransferase alpha-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118