Protein Concepts Dictionary

Tableau information

Concept source:  d1oyka_  amino acid (a.a.) range (ASP12)(HIS223)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP12)   (THR21) H1
	   (THR21)   (ALA31) H2
	   (ALA31)   (GLY40) H3
	   (THR43)   (ASN68) H4
	   (PRO72)   (TYR78) H5
	   (ARG85)   (TRP96) H6
	  (TRP101)  (ILE105) H7
	  (THR108)  (GLU125) H8
	  (GLU125)  (GLY143) H9
	  (GLN145)  (ASP156) H10
	  (GLU162)  (PHE167) H11
	  (SER174)  (LEU189) H12
	  (THR192)  (HIS223) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2      -46.2°   H2                                                                                  
H3      -93.7°  -65.1°   H3                                                                           
H4      149.8°  146.5° -116.5°   H4                                                                    
H5      -85.1°  -58.1°    8.7° -125.2°   H5                                                             
H6      -33.1°   13.1°   73.4° -153.7°   65.4°   H6                                                      
H7       59.1°  104.9°  132.4°  -96.9°  126.8°   91.8°   H7                                               
H8      154.6° -154.3° -109.6°  -11.5° -118.2° -164.3°  -96.7°   H8                                        
H9      -70.6°  -54.2°  -24.7° -139.1°   17.0°   57.7°  110.1° -130.1°   H9                                 
H10      42.5°    4.6°   69.3° -147.2°  -62.1°    9.5°  100.8° -156.3°  -57.3°   H10                         
H11    -121.0° -166.0° -115.9°   46.9°  121.2° -153.8°  -63.5°   39.7° -120.4°  163.2°   H11                  
H12     105.9°  135.0° -158.9°   44.3°  166.8° -127.7°  -56.9°   49.8° -163.6°  131.1°  -46.8°   H12           
H13     -36.8°    9.5°   69.6°  153.6°  -61.8°    4.2°   95.7° -163.0°  -54.8°    6.7° -156.8°  131.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xk2a_ :    (ASP12)  (THR222)   [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Human (Homo sapiens) [TaxId: 9606]
 d1ni6a_ :    (ASP12)  (THR222)   [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Human (Homo sapiens) [TaxId: 9606]
 d1xk0a1 :    (ASP12)  (HIS223)   [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Human (Homo sapiens) [TaxId: 9606]
 d1oyka_ :    (ASP12)  (HIS223)   [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Human (Homo sapiens) [TaxId: 9606]
 d1j2ca_ :    (ASP12)  (THR222)   [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1ni6c_ :    (LEU13)  (HIS223)   [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Human (Homo sapiens) [TaxId: 9606]
 d1xjza1 :    (LEU13)  (THR222)   [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.132