Protein Concepts Dictionary

Tableau information

Concept source:  d2d09a_  amino acid (a.a.) range (VAL148)(ARG373)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL148)  (GLY162) H1
	  (PRO164)  (LEU179) H2
	  (SER188)  (SER209) H3
	  (VAL214)  (ASP225) H4
	  (THR228)  (ARG260) H5
	  (ALA264)  (GLU270) H6
	  (ARG274)  (TRP284) H7
	  (LEU293)  (GLU299) E8
	  (GLU299)  (LYS304) E9
	  (GLY305)  (ARG309) E10
	  (ASP312)  (TYR318) E11
	  (TYR318)  (ASP324) H12
	  (GLY356)  (ARG373) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2      113.8°   H2                                                                                  
H3      -42.9° -148.2°   H3                                                                           
H4      -32.5°   83.0°  -75.2°   H4                                                                    
H5      153.6°  -78.8°  114.8°  157.2°   H5                                                             
H6       52.8°  150.0°   10.3°   84.7° -104.5°   H6                                                      
H7      -99.5°   36.1° -141.8°  -68.1°  103.2° -152.0°   H7                                               
E8       56.7°   60.5°  -88.6°   36.6° -120.9°   94.2°  -68.1°   E8                                        
E9      142.5°  -71.9°  112.7°  141.7°  -16.5°  102.7° -102.7° -105.1°   E9                                 
E10     -57.1°  106.3°  -79.7°  -54.8°  144.4°  -88.4°   71.0°  -90.3°  160.0°   E10                         
E11     116.9° -120.2°   74.2°  148.0°  -42.4°   64.2° -143.6°  133.5°   48.6° -126.8°   E11                  
H12     109.3°  -81.2°   87.8°  116.1°  -47.6°   79.8° -117.3°   83.2°   33.2° -166.1°  -53.9°   H12           
H13     139.9° -106.1°   98.6°  169.0°  -33.8°  -89.9°  115.7° -153.9°  -49.0°  115.6°  -30.6°  -72.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2z3ua_ :   (VAL149)  (GLU373)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces sp. [TaxId: 171258]
 d3o1aa_ :   (PRO150)  (PRO354)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Actinoplanes teichomyceticus [TaxId: 1867]
 d1po5a_ :   (ASP192)  (PHE457)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2b4 |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2bvja_ :   (LEU144)  (PRO376)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
 d3a4ha_ :   (LEU137)  (MET322)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Pseudonocardia autotrophica [TaxId: 2074]
 d4mm0b_ :   (PRO153)  (PHE319)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces griseoviridis [TaxId: 45398]
 d3p3xa_ :   (PHE143)  (ARG375)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces thioluteus [TaxId: 66431]
 d1gwia_ :   (LEU143)  (ARG334)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp154c1 monooxygenase |Streptomyces coelicolor [TaxId: 1902]
 d2c7xa_ :   (THR155)  (GLU373)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
 d1t93a_ :   (PRO164)  (VAL374)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d3p3oa_ :   (PHE143)  (ARG375)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces thioluteus [TaxId: 66431]
 d4mm0a_ :   (ILE133)  (PHE319)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces griseoviridis [TaxId: 45398]
 d1f4ta_ :   (LEU121)  (ARG337)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp119 |Sulfolobus solfataricus [TaxId: 2287]
 d3zk5a_ :   (ALA149)  (PRO330)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
 d2cd8a_ :   (THR155)  (GLU373)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
 d3tnka_ :   (PRO164)  (ARG373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d3p3la_ :   (PHE143)  (ARG375)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces thioluteus [TaxId: 66431]
 d3a4ga_ :   (PRO157)  (ARG327)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Pseudonocardia autotrophica [TaxId: 2074]
 d3tzoa_ :   (PRO164)  (ARG373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d3p3xb_ :   (PHE143)  (ARG375)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces thioluteus [TaxId: 66431]
 d1egya_ :   (ILE140)  (PRO373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-ERYF |Saccharopolyspora erythraea [TaxId: 1836]
 d2d09a_ :   (VAL148)  (ARG373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d4l40a_ :   (TYR135)  (THR343)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Jeotgalicoccus sp. [TaxId: 946435]
 d1z8oa_ :   (ILE140)  (PHE372)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-ERYF |Saccharopolyspora erythraea [TaxId: 1836]
 d4ep6a_ :   (ALA287)  (PHE476)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
 d2vzma_ :   (ALA149)  (GLU373)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
 d4pwva_ :   (PHE145)  (ARG342)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces sp. [TaxId: 1001349]
 d1gwib_ :   (LEU143)  (HIS328)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp154c1 monooxygenase |Streptomyces coelicolor [TaxId: 1902]
 d4j6ca_ :   (ALA150)  (ASP336)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Nocardia farcinica [TaxId: 247156]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104