Protein Concepts Dictionary

Tableau information

Concept source:  d1nlzd_  amino acid (a.a.) range (SER143)(LEU309)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER143)  (GLY149) H1
	  (GLY149)  (ASP155) H2
	  (ASN156)  (GLY171) H3
	  (ASN173)  (GLY179) E4
	  (GLY183)  (PHE194) H5
	  (ARG200)  (GLU205) E6
	  (ASN217)  (GLY224) E7
	  (SER229)  (MSE239) H8
	  (ASP242)  (GLU248) E9
	  (GLU253)  (SER263) H10
	  (LYS266)  (LEU272) E11
	  (SER276)  (ASN291) H12
	  (LYS298)  (LEU309) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2      -57.5°   H2                                                                                  
H3      168.2°  116.0°   H3                                                                           
E4       49.4°   95.1° -126.4°   E4                                                                    
H5     -121.6°  -95.2°  -66.9°  156.0°   H5                                                             
E6       60.4°   87.5°  111.4°  -23.5° -177.2°   E6                                                      
E7       72.0°   81.0°   97.8°  -42.8°  161.0°  -19.3°   E7                                               
H8     -123.1°  -95.8°   65.3°  157.0°   -1.5°  176.1°  159.7°   H8                                        
E9       51.2°   85.3°  121.2°  -15.7°  170.6°  -10.2°  -28.3°  172.0°   E9                                 
H10    -107.9°  -79.1°   78.8° -153.0°   16.9° -165.9°  155.7°   17.9° -158.9°   H10                         
E11      49.2°   89.9° -124.9°   -7.5°  163.0°  -17.0°  -36.0°  164.2°   -8.2° -156.3°   E11                  
H12     136.2° -104.8°  -32.7°  100.2°  -98.0°   80.7°   65.4°  -96.5°   90.9° -106.7°   96.3°   H12           
H13     -96.9° -114.3°   94.8° -111.4°   44.7° -134.4° -153.0°   45.6° -126.8°   50.6° -118.6°  125.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1g6oa_ :   (SER143)  (ILE297)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
 d2pt7c_ :   (SER143)  (LEU309)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
 d2pt7b_ :   (SER143)  (LEU309)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
 d1nlzd_ :   (SER143)  (LEU309)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
 d2pt7a_ :   (SER143)  (LEU309)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
 d1nlzb_ :   (SER143)  (LEU309)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
 d1nlze_ :   (SER143)  (LEU309)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37