Protein Concepts Dictionary

Tableau information

Concept source:  d2noia2  amino acid (a.a.) range (PRO137)(ASP322)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHEEHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO137)  (SER148) H1
	  (ILE152)  (ALA165) H2
	  (LEU170)  (ASP174) E3
	  (ASP175)  (GLY180) E4
	  (SER183)  (GLY189) H5
	  (VAL192)  (GLY200) H6
	  (ARG204)  (GLU218) H7
	  (LEU222)  (SER232) H8
	  (SER232)  (LEU243) H9
	  (THR248)  (ALA258) H10
	  (VAL269)  (SER280) H11
	  (SER292)  (LEU306) H12
	  (TYR310)  (ASP322) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2      129.7°   H2                                                                                  
E3      -60.7° -117.4°   E3                                                                           
E4      113.4°   81.6°  159.9°   E4                                                                    
H5       35.6°   95.3°  -81.7° -104.1°   H5                                                             
H6      -54.5°  136.3°   19.1° -141.1°  -84.1°   H6                                                      
H7      147.5°  -53.3°  151.6°   36.2° -123.5°  152.1°   H7                                               
H8       93.9° -135.0°   91.5°  -69.2°  124.1°  -74.7°   84.6°   H8                                        
H9      -57.9°   72.3°  -78.0°  116.3°  -28.9°  -89.3°  116.9° -151.6°   H9                                 
H10     148.2°  -70.3°   88.7°  -92.2°  156.6°   93.8°  -63.0°  -77.2°  128.2°   H10                         
H11      79.7° -150.6°   75.3°  -84.8° -113.3°   57.7°  102.3°  -17.7° -137.0°   84.4°   H11                  
H12     129.7°  -96.8°   83.1°  -88.4°  163.8°   79.7°  -72.7°  -50.6°  150.1°  -27.7°   56.8°   H12           
H13      47.3° -115.6°  -17.0°  159.4°   64.8°   27.3° -164.3° -101.7°  -62.9° -104.1°   84.3°  100.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2nofa1 :   (ASP136)  (ASP322)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1m3ha1 :   (ASP136)  (GLN325)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d2noia2 :   (PRO137)  (ASP322)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d2noba1 :   (ILE152)  (GLN325)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d2nola1 :   (ASP136)  (LEU323)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1n3aa1 :   (ASP136)  (GLN325)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1yqla1 :   (PRO137)  (GLN325)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1ko9a1 :   (ASP136)  (ASP322)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d2xhia2 :   (ASP136)  (ARG324)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2noha1 :   (ASP136)  (GLN325)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1ebma1 :   (ASP136)  (ARG324)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1fn7a1 :   (ASP136)  (GLN325)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1yqka1 :   (PRO137)  (LEU323)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]
 d1n3ca1 :   (ASP136)  (GLN325)   [view usage] : a.96.1.3 |DNA-glycosylase |DNA-glycosylase |DNA repair glycosylase, 2 C-terminal domains |8-oxoguanine glycosylase |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.96