Protein Concepts Dictionary

Tableau information

Concept source:  d2yhea1  amino acid (a.a.) range (SER38)(HIS179)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHEEEHHEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER38)   (ASN51) H1
	   (PRO53)   (ARG65) H2
	   (ILE68)   (SER72) E3
	   (SER72)   (ASN77) E4
	   (VAL83)   (GLY87) E5
	   (GLY87)   (LEU92) H6
	  (ASN102)  (ASN113) H7
	  (GLY116)  (MET121) E8
	  (LYS123)  (GLY129) E9
	  (ALA133)  (GLU139) E10
	  (SER142)  (ASP148) E11
	  (THR152)  (GLN165) H12
	  (VAL173)  (HIS179) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2       79.8°   H2                                                                                  
E3     -169.9°  109.4°   E3                                                                           
E4      115.8°   54.3°  -73.9°   E4                                                                    
E5      -75.3° -121.8°  -95.7° -164.6°   E5                                                             
H6      -77.4° -153.1°  -92.6°  151.1°  -37.6°   H6                                                      
H7      -66.4°  -16.5°  121.7°   70.4° -107.4° -136.6°   H7                                               
E8       18.2°   84.2° -161.3°  106.2°   87.3°   78.5°   74.4°   E8                                        
E9     -159.4° -119.2°  -10.5°  -83.7°   87.0°   82.2° -130.3°  155.1°   E9                                 
E10     -33.3°   47.0°  154.5°   92.9°  -92.2° -108.1°   33.1°  -43.1°  161.5°   E10                         
E11     128.6° -145.7°  -45.0°  -92.5°   87.7°   61.2° -162.1°  117.0°  -38.5°  160.0°   E11                  
H12     -39.4°  -75.6°  137.1°  129.3°  -52.2°  -77.8°   59.2°  -57.5°  132.8°  -40.5°  138.2°   H12           
E13     116.2° -153.3°  -57.2°  -99.1°   84.0°   52.9° -168.4°  104.9°  -50.3°  148.0°  -12.3°  130.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2cfza2 :    (SER27)  (HIS169)   [view usage] : d.157.1.13 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Alkylsulfatase-like |Alkylsulfatase SdsA1 |Pseudomonas aeruginosa [TaxId: 287]
 d4av7a1 :    (SER38)  (HIS179)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
 d4axhb1 :    (SER38)  (HIS179)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
 d2cg2a2 :    (SER27)  (HIS169)   [view usage] : d.157.1.13 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Alkylsulfatase-like |Alkylsulfatase SdsA1 |Pseudomonas aeruginosa [TaxId: 287]
 d2yhea1 :    (SER38)  (HIS179)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157