Protein Concepts Dictionary

Tableau information

Concept source:  d3d5ua_  amino acid (a.a.) range (LEU124)(THR287)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HHEEEEEHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU124)  (ARG130) H1
	  (THR135)  (ARG157) H2
	  (ARG157)  (ASP162) E3
	  (LEU168)  (ASP172) E4
	  (VAL176)  (GLY182) E5
	  (LEU183)  (PHE189) E6
	  (GLY191)  (LYS195) E7
	  (PRO206)  (LYS211) H8
	  (LYS212)  (PHE216) E9
	  (GLU217)  (GLY233) H10
	  (CYS241)  (ASN252) H11
	  (ASN261)  (HIS273) H12
	  (SER281)  (THR287) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
H2     -158.4°   H2                                                                                  
E3      -39.1°  133.5°   E3                                                                           
E4       86.4°  114.9°   85.9°   E4                                                                    
E5     -115.4°  -48.2°   86.2°  130.5°   E5                                                             
E6      129.6°  -47.1°  158.4° -113.9°  -86.7°   E6                                                      
E7      -66.5°  104.8°  -28.9°   97.6°   58.8°  144.0°   E7                                               
H8     -118.8°   44.7°  -89.5°  129.9°   -3.5°   83.9°  -61.9°   H8                                        
E9       99.4° -101.6°  110.9°  -27.0° -138.7°  -87.6°  124.5° -136.2°   E9                                 
H10      28.9°  168.5°   41.6°  -58.1°  127.6° -142.6°  -69.0° -130.8°  -75.6°   H10                         
H11     101.4°  -78.0°  139.3°  104.3° -113.0°  -31.0° -154.4° -111.0°   78.6°  111.9°   H11                  
H12    -132.5°   28.9° -105.9°  130.4°  -19.7°   68.3°  -78.2°  -16.4°  127.1° -147.2°  -97.0°   H12           
H13      45.1° -153.9°   71.2°  -50.1°  157.4° -114.4°  -98.9° -160.7°  -54.9°  -29.9°   85.4° -177.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3sxra_ :   (LEU497)  (ARG670)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gfga_ :   (ASN457)  (GLY637)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Tyrosine-protein kinase SYK |Human (Homo sapiens) [TaxId: 9606]
 d2ou7a_ :   (LEU138)  (GLY308)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4j96b_ :   (LEU572)  (ASN766)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Fibroblast growth factor receptor 2 |Human (Homo sapiens) [TaxId: 9606]
 d3hmia_ :   (ASN377)  (SER546)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yaca_ :   (LEU138)  (GLY308)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3d5ua_ :   (LEU124)  (THR287)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
 d3fc2a_ :   (LEU138)  (ASP302)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3sxsa_ :   (LEU497)  (ARG670)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2owba_ :   (LEU138)  (ASN301)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4j98a_ :   (LEU572)  (THR764)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Fibroblast growth factor receptor 2 |Human (Homo sapiens) [TaxId: 9606]
 d4j52a_ :   (LEU138)  (THR320)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144