Tableau information
Concept source: d1osea2 amino acid (a.a.) range (LYS172)(SER341)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEHHEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS172) (ILE189) H1
(ALA192) (ALA198) E2
(ALA198) (TRP203) H3
(TRP203) (LEU214) H4
(PHE229) (ILE235) E5
(GLN243) (GLY251) H6
(GLY251) (PHE256) E7
(PHE256) (LYS268) H8
(LYS273) (ASN279) H9
(ALA292) (VAL296) E10
(ASN298) (GLY304) H11
(ALA318) (ALA330) H12
(PHE335) (SER341) E13
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 143.1° E2
H3 -140.8° 75.8° H3
H4 -46.2° 159.6° 99.9° H4
E5 126.1° -17.3° -92.2° 161.0° E5
H6 -58.8° 153.3° 86.4° -13.6° 165.7° H6
E7 88.0° -55.2° -130.0° 129.4° -38.2° 142.9° E7
H8 64.7° -80.6° -145.0° 110.7° -63.4° -123.5° -29.0° H8
H9 -98.8° 117.8° 42.0° -61.3° 133.6° -48.3° 167.2° -148.0° H9
E10 70.1° -74.9° -148.3° 103.2° -60.5° 115.9° -28.6° -37.9° -164.0° E10
H11 102.4° -40.7° -116.4° 140.1° 24.3° 152.3° -15.2° -43.7° 157.9° -36.9° H11
H12 -90.8° 121.2° 52.4° -66.7° 131.9° -56.6° 148.1° 126.1° -22.4° -158.9° 150.0° H12
E13 82.2° -73.8° 126.1° 93.9° -67.1° 102.4° -53.0° -69.4° 138.5° -31.5° -52.0° -157.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1jd7a2 : (SER149) (SER304) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1clva2 : (SER160) (SER325) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
d1kxha2 : (SER149) (SER304) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1dhka2 : (LYS172) (SER341) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Pig (Sus scrofa) [TaxId: 9823]
d1jd9a2 : (SER149) (SER304) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1jxja2 : (LYS172) (SER341) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Human (Homo sapiens) [TaxId: 9606]
d1aqha2 : (SER149) (SER304) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1nm9a2 : (LYS172) (SER341) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1