Protein Concepts Dictionary

Tableau information

Concept source:  d4bl5a_  amino acid (a.a.) range (ASP50)(VAL244)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEEHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP50)   (VAL61) H1
	   (THR64)   (LEU69) E2
	   (LEU76)   (TYR82) H3
	   (TYR82)  (GLY105) H4
	  (ARG107)  (CYS112) E5
	  (ASN140)  (TYR161) H6
	  (PHE165)  (THR171) E7
	  (THR171)  (PRO176) E8
	  (VAL187)  (SER200) H9
	  (ALA204)  (TRP208) E10
	  (ARG215)  (TYR219) E11
	  (TYR219)  (ARG232) H12
	  (GLU238)  (VAL244) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      135.1°   E2                                                                                  
H3     -129.7°   94.9°   H3                                                                           
H4      -36.1° -171.2°  -93.9°   H4                                                                    
E5      128.0°   -7.8° -102.2°  163.7°   E5                                                             
H6      -49.9° -164.5°   83.3°  -18.6° -161.3°   H6                                                      
E7      107.8°  -27.4° -122.4°  143.8°  -20.2° -150.4°   E7                                               
E8       71.2°  -88.0°  114.9°   88.5°  -87.4°  106.7°   77.4°   E8                                        
H9       98.7°  -49.5°  116.2°  125.8°  -48.5°  144.3°   41.4°  -38.9°   H9                                 
E10     -97.5°  118.7°   48.9°  -67.6° -121.7°  -49.6° -134.9°  147.3°  163.4°   E10                         
E11      37.4° -131.2°  110.9°   44.6° -129.0°   63.0° -113.5°  -43.9°  -81.7°  109.4°   E11                  
H12     -67.1°  153.2°  -66.7°  -33.5°  155.6°   17.2°  159.7° -117.0° -155.7°   34.5°   75.2°   H12           
E13      87.0°  -49.3° -139.6°  122.4°  -43.7°  136.4°  -25.5°   55.5°   28.9° -156.8°   88.0°  153.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2q1wa_ :    (ASP57)  (SER226)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bordetella bronchiseptica [TaxId: 518]
 d3wmxb_ :    (ASP57)  (GLY245)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
 d3sc6d_ :    (ILE42)  (ASN211)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d4b8za_ :    (ASP50)  (SER243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bl5a_ :    (ASP50)  (VAL244)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yy7a_ :    (ASN58)  (ALA244)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Flavobacterium frigidimaris [TaxId: 262320]
 d3sc6c_ :    (ILE42)  (ASN211)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d4bl5d_ :    (ASP50)  (SER243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bl5c_ :    (ASP50)  (SER243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3sc6a_ :    (ASN41)  (ASN211)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2