Protein Concepts Dictionary

Tableau information

Concept source:  d2xe6a_  amino acid (a.a.) range (GLY186)(ASN336)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHHEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY186)  (LEU200) H1
	  (PHE207)  (GLY213) E2
	  (ILE220)  (LYS229) H3
	  (ASN231)  (GLY236) E4
	  (ALA240)  (ASN249) H5
	  (ASP258)  (ILE264) H6
	  (ILE264)  (ASN275) H7
	  (VAL277)  (PRO282) E8
	  (PHE285)  (ASP289) E9
	  (LYS296)  (THR301) E10
	  (GLY309)  (ASP314) E11
	  (PRO317)  (ALA330) H12
	  (LYS331)  (ASN336) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2     -108.8°   E2                                                                                  
H3      -65.2° -167.1°   H3                                                                           
E4     -110.1°  -19.5°  149.2°   E4                                                                    
H5      -10.3°  -98.5°  -75.4° -100.7°   H5                                                             
H6      -41.4° -148.2°  -31.4° -151.0°  -51.2°   H6                                                      
H7       77.0° -169.0°  -12.1° -150.0°  -87.3°   40.6°   H7                                               
E8      105.2°  -40.0°  128.6°  -20.7°  -98.1° -139.5° -130.1°   E8                                        
E9     -116.1°   -7.3°  169.6°   20.6° -105.8° -154.7°  164.5°  -41.1°   E9                                 
E10      36.9°  140.4°  -40.1°  146.8°   46.0°   -8.7°  -49.0° -140.1°  146.5°   E10                         
E11     103.9° -146.4°   39.1° -136.1°  114.3°   65.4°   27.0°  123.2°  139.5°  -72.9°   E11                  
H12      95.2° -147.5°   45.0° -154.7°  104.3°   54.3°   36.6° -151.8° -141.6°   58.4°  -30.5°   H12           
E13    -115.6°  -19.0°  173.8°  -37.0°  105.5°  145.4°  164.6°  -57.6°  -16.5°  136.8° -138.9°  129.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2xe6a_ :   (GLY186)  (ASN336)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ybea_ :   (PHE187)  (ASN336)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kf0a_ :   (GLY186)  (GLY337)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]
 d1zmra_ :   (PRO165)  (ASN307)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Escherichia coli [TaxId: 562]
 d3q3va_ :   (GLY172)  (ASN320)   [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d1vjca_ :   (ASN194)  (GLY337)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.86