Protein Concepts Dictionary

Tableau information

Concept source:  d2akmb1  amino acid (a.a.) range (THR271)(LEU416)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR271)  (ASP285) H1
	  (VAL289)  (ASP293) E2
	  (ASP299)  (VAL310) H3
	  (ILE312)  (GLY316) E4
	  (GLY316)  (VAL321) H5
	  (ASN323)  (GLU333) H6
	  (ASN337)  (LYS342) E7
	  (LYS342)  (GLY347) H8
	  (VAL349)  (GLY363) H9
	  (GLY365)  (HIS370) E10
	  (PHE379)  (CYS388) H11
	  (GLY390)  (THR394) E12
	  (ARG399)  (LEU416) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      155.5°   E2                                                                                  
H3      -29.2° -173.1°   H3                                                                           
E4      132.4°  -25.0° -154.9°   E4                                                                    
H5     -130.6°   39.8° -135.3°  -29.0°   H5                                                             
H6      -80.8°  123.3°  -53.9°  146.2°  128.4°   H6                                                      
E7       92.8°  -62.7°  121.8°  -43.8°  -65.7°  165.1°   E7                                               
H8     -145.2°   31.3° -142.3°   32.2°  -15.3°  117.9°  -74.7°   H8                                        
H9      -77.2°  127.3°  -49.1°  148.0°  126.1°   -7.5° -167.9°  117.4°   H9                                 
E10      94.5°  -63.0°  123.1°  -51.8°  -78.6°  147.4°  -19.0°  -83.9°  153.3°   E10                         
H11     -81.6°  118.4°  -54.9°  124.4°   95.9°  -42.5°  150.2°   93.3°  -35.9°  168.9°   H11                  
E12     107.2°  -56.2°  130.7°  -56.9°  -85.9°  127.7°  -41.5°  -85.0°  135.0°  -24.0°  166.7°   E12           
H13     -52.8°  132.2°  -42.4°  117.0°   92.9°  -75.0°  111.9°  101.2°  -67.5°  127.1°  -42.8°  150.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4a3ra2 :   (THR266)  (ALA414)   [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |automated matches |Bacillus subtilis [TaxId: 1423]
 d3zlfa2 :   (THR271)  (GLY419)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
 d1e9id1 :   (THR268)  (GLY416)   [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Escherichia coli [TaxId: 562]
 d2xh0a2 :   (THR274)  (GLU418)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2ptxa1 :   (THR270)  (LEU417)   [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d2akmb1 :   (THR271)  (LEU416)   [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Human (Homo sapiens), gamma isoform [TaxId: 9606]
 d1iyxa1 :   (THR267)  (ASP411)   [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Enterococcus hirae [TaxId: 1354]
 d4ropa2 :   (GLU266)  (ALA412)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Synechococcus elongatus [TaxId: 269084]
 d3qn3a2 :   (SER259)  (GLU403)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
 d1w6tb1 :   (THR270)  (GLY418)   [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d3zlga2 :   (THR271)  (GLN417)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
 d1te6a1 :   (GLY272)  (GLY417)   [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Human (Homo sapiens), gamma isoform [TaxId: 9606]
 d2xh2a2 :   (THR274)  (GLU418)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3zlfb2 :   (THR271)  (GLY419)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
 d3uj2a2 :   (ALA268)  (GLY416)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Anaerostipes caccae [TaxId: 411490]
 d3zlfc2 :   (THR271)  (GLY419)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
 d3zlha2 :   (THR271)  (GLY419)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1