Protein Concepts Dictionary

Tableau information

Concept source:  d4mafb2  amino acid (a.a.) range (SER226)(CYS434)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER226)  (ASN238) H1
	  (ASP240)  (GLN246) E2
	  (ASN253)  (MET269) H3
	  (LYS272)  (TYR284) E4
	  (LEU292)  (GLY306) H5
	  (THR313)  (ILE317) E6
	  (GLY326)  (GLY341) H7
	  (ASN343)  (ARG349) E8
	  (ASP365)  (MET375) H9
	  (PRO377)  (ASN383) H10
	  (ASN383)  (ARG388) E11
	  (SER414)  (LYS425) H12
	  (PRO429)  (CYS434) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      138.6°   E2                                                                                  
H3      -50.5°  161.2°   H3                                                                           
E4      160.8°  -27.1°  148.3°   E4                                                                    
H5       -3.5°  135.4°  -52.9°  158.7°   H5                                                             
E6      173.3°  -45.5°  127.8°  -20.5° -176.0°   E6                                                      
H7      -57.5°  148.2°  -48.1°  127.0°  -61.0°  116.2°   H7                                               
E8      110.0°  -31.5°  141.0°  -58.5°  106.5°  -75.3°  157.8°   E8                                        
H9      -77.6°  143.7°  -32.3°  118.8°  -80.7°   98.9°  -41.8° -159.8°   H9                                 
H10      21.0° -127.9°  -66.4° -141.7°  -21.6°  154.7°   54.4° -106.8°  -86.8°   H10                         
E11      94.3°  -44.8°  135.1°  -71.4°   90.9°  -90.2°  140.7°  -17.8° -166.6°  -89.1°   E11                  
H12      82.1°  -74.6° -123.8°  -80.1°   81.5°  -95.5°   83.6°   76.1° -124.0°   61.6°   64.4°   H12           
H13      97.4° -120.3°   63.7°  -93.2° -100.9°  -77.0°   41.8° -151.7°   33.3°   96.1° -160.2° -101.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2qjfa2 :   (PRO400)  (LEU621)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4mafa2 :   (SER226)  (CYS434)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d4mafd2 :   (SER226)  (SER447)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d4mafc2 :   (SER226)  (CYS434)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d4mafb2 :   (SER226)  (CYS434)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26