Protein Concepts Dictionary

Tableau information

Concept source:  d1jxaa1  amino acid (a.a.) range (GLY282)(LYS452)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY282)  (VAL292) H1
	  (GLU293)  (ALA299) E2
	  (GLY301)  (GLY319) H3
	  (PRO321)  (ILE326) E4
	  (ALA327)  (ARG333) H5
	  (LEU342)  (SER347) E6
	  (ASP354)  (GLY366) H7
	  (GLY369)  (ILE373) E8
	  (SER379)  (SER385) H9
	  (ASP386)  (ASN392) E10
	  (LYS403)  (LYS423) H11
	  (SER428)  (LEU440) H12
	  (LEU440)  (LYS452) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      105.1°   E2                                                                                  
H3      -73.0° -164.3°   H3                                                                           
E4      103.1°  -12.7° -175.0°   E4                                                                    
H5       75.1° -115.2°   79.8°  102.5°   H5                                                             
E6     -112.3°  -17.3°  148.6°  -29.6° -131.5°   E6                                                      
H7       74.8°  151.6°  -43.8°  139.0°   36.7° -166.0°   H7                                               
E8     -110.0°  -46.6°  118.6°  -59.3° -161.5°  -30.0°  160.9°   E8                                        
H9       82.6°  158.6°  -37.0°  146.7°   46.7° -164.7°   11.8° -149.7°   H9                                 
E10    -106.2°  -54.4°  110.5°  -67.1° -169.6°  -38.1°  153.8°   -8.4° -143.5°   E10                         
H11     -76.8°  173.1°  -22.6°  160.8°   58.6°  166.9°   22.0°  139.3°   14.6°  131.8°   H11                  
H12     120.7°   22.0°  146.9°  -32.6° -131.3°    8.4° -160.7°   30.6° -156.4°  -39.0° -160.2°   H12           
H13      77.3°  -34.6°  132.9°  -42.3°  126.3°  -35.2°  150.8°  -42.7°  160.0°  -45.7°  150.6°  -43.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1mosa_ :   (GLY282)  (LYS464)   [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
 d1jxaa1 :   (GLY282)  (LYS452)   [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
 d2pocb_ :   (LEU389)  (ASN554)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Candida albicans [TaxId: 237561]
 d3oojc2 :   (ALA285)  (SER449)   [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
 d2j6ha1 :   (ALA285)  (LYS464)   [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
 d1moqa_ :   (GLY282)  (LYS464)   [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |"Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) |Escherichia coli [TaxId: 562]
 d3tbfd_ :   (LYS288)  (ASN442)   [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Francisella tularensis [TaxId: 119856]
 d2v4md_ :   (ILE378)  (SER540)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vf4x_ :   (GLY282)  (SER449)   [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.80