Protein Concepts Dictionary

Tableau information

Concept source:  d1rjwa2  amino acid (a.a.) range (CYS148)(GLY302)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (CYS148)  (THR160) H1
	  (GLU166)  (GLY172) E2
	  (GLY174)  (GLY188) H3
	  (ASN190)  (ILE196) E4
	  (ASP198)  (GLY208) H5
	  (ASP210)  (ASN214) E6
	  (ASP219)  (GLY229) H7
	  (HIS232)  (ALA238) E8
	  (SER240)  (SER250) H9
	  (GLY255)  (GLY261) E10
	  (PRO270)  (LEU276) H11
	  (GLY278)  (VAL286) E12
	  (THR288)  (GLY302) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      141.5°   E2                                                                                  
H3      -50.5° -167.6°   H3                                                                           
E4      122.2°  -20.0° -168.2°   E4                                                                    
H5      -75.1°  142.9°  -26.6°  162.7°   H5                                                             
E6      103.9°  -37.6°  153.8°  -18.8°  175.3°   E6                                                      
H7      -56.3°  160.3°   -8.3°  164.1°  -25.4°  156.4°   H7                                               
E8      152.1°  -13.5°  156.3°  -33.3°  130.1°  -49.8°  151.5°   E8                                        
H9      -34.5°  167.8°  -18.9°  150.2°  -45.5°  135.2°  -22.4°  173.0°   H9                                 
E10     161.8°  -28.2°  142.0°  -48.0°  115.5°  -64.2°  138.2°  -14.7°  160.5°   E10                         
H11     -63.8° -154.7°   13.3°  169.5°  -14.7°  166.8°   10.8° -143.1°   31.6° -128.9°   H11                  
E12     158.1°  -57.0°  112.3°  -77.0°   86.1°  -93.9°  108.5°  -44.1°  130.8°  -29.8°  -99.2°   E12           
H13     106.8°  -90.1°   81.4°  -93.5°   80.1° -104.5°   73.3°  -91.2°   82.8°  -90.0°   76.1°  -80.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1pl6a2 :   (THR147)  (LYS313)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Ketose reductase (sorbitol dehydrogenase) |Human (Homo sapiens) [TaxId: 9606]
 d1pl7a2 :   (THR147)  (LYS313)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Ketose reductase (sorbitol dehydrogenase) |Human (Homo sapiens) [TaxId: 9606]
 d1r37a2 :   (LEU152)  (GLY312)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Sulfolobus solfataricus [TaxId: 2287]
 d1f8fa2 :   (THR177)  (GLY335)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Benzyl alcohol dehydrogenase |Acinetobacter calcoaceticus [TaxId: 471]
 d1piwa2 :   (CYS163)  (ASP318)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Cinnamyl alcohol dehydrogenase, ADH6 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1rjwa2 :   (CYS148)  (GLY302)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Bacillus stearothermophilus [TaxId: 1422]
 d1vj0a2 :   (LEU158)  (ASN330)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Hypothetical protein TM0436 |Thermotoga maritima [TaxId: 2336]
 d1ntoa2 :   (CYS154)  (GLY312)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Sulfolobus solfataricus [TaxId: 2287]
 d1qora2 :   (SER114)  (LEU283)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Quinone oxidoreductase |Escherichia coli [TaxId: 562]
 d1e3ea2 :   (PHE180)  (LYS340)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Mouse (Mus musculus), class II [TaxId: 10090]
 d1h2ba2 :   (ASP168)  (GLY325)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Aeropyrum pernix [TaxId: 56636]
 d1llua2 :   (THR158)  (GLY308)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Pseudomonas aeruginosa [TaxId: 287]
 d1jvba2 :   (ALA146)  (GLY312)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Alcohol dehydrogenase |Sulfolobus solfataricus [TaxId: 2287]
 d1e3ja2 :   (LEU150)  (GLY311)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Ketose reductase (sorbitol dehydrogenase) |Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
 d1o89a2 :   (GLY125)  (ALA284)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Hypothetical protein YhdH |Escherichia coli [TaxId: 562]
 d1tt7a2 :   (THR130)  (SER290)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Hypothetical protein YhfP |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2