Protein Concepts Dictionary

Tableau information

Concept source:  d3e05b_  amino acid (a.a.) range (GLN234)(LYS402)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN234)  (LEU244) H1
	  (LEU250)  (GLY256) E2
	  (ALA260)  (MET270) H3
	  (GLY273)  (GLU279) E4
	  (PRO282)  (LYS294) H5
	  (ASN299)  (GLU304) E6
	  (ALA307)  (ASP313) H7
	  (ASP318)  (GLY323) E8
	  (LEU329)  (ARG339) H9
	  (GLU343)  (ASN349) E10
	  (THR352)  (GLY367) H11
	  (MET369)  (LYS379) E12
	  (MET388)  (LYS402) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      138.9°   E2                                                                                  
H3      -51.0°  170.1°   H3                                                                           
E4      127.8°  -12.7° -174.4°   E4                                                                    
H5      -79.9°  141.2°  -29.0°  150.9°   H5                                                             
E6      108.7°  -31.6°  157.8°  -19.3° -164.3°   E6                                                      
H7      -45.5°  153.9°  -29.7°  144.8°  -46.5°  131.3°   H7                                               
E8      156.1°  -19.5°  150.8°  -32.0°  122.9°  -51.1°  155.7°   E8                                        
H9      -36.1°  170.6°  -17.8°  158.2°  -44.8°  140.0°   18.8°  167.6°   H9                                 
E10     160.7°  -23.6°  146.6°  -35.9°  118.4°  -55.1°  152.1°   -4.6°  163.0°   E10                         
H11      -4.0°  142.5°  -47.4°  131.1°  -76.2°  112.0°  -41.6°  160.1°  -32.1°  164.7°   H11                  
E12     158.2°  -62.9°  107.2°  -74.0°   78.4°  -92.9°  116.9°  -44.9°  122.7°  -40.3°  154.5°   E12           
E13     -14.8°  127.2°  -62.7°  115.1°  -90.7°   95.9°  -49.7°  146.3°  -45.9°  150.7°   16.8°  166.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e05g_ :   (GLN234)  (LYS402)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
 d4oa5d_ :    (GLY41)  (ILE215)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
 d3o4fe_ :    (THR56)  (THR237)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1f38a_ :  (ALA1118) (TYR1283)   [view usage] : c.66.1.22 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Precorrin-6Y methyltransferase (CbiT) |Precorrin-6Y methyltransferase (CbiT) |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d2avda1 :    (THR87)  (LYS261)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |COMT domain-containing protein 1, COMTD1 |Human (Homo sapiens) [TaxId: 9606]
 d3e05d_ :   (GLN234)  (LYS402)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
 d1dusa_ :    (ASP41)  (SER194)   [view usage] : c.66.1.4 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Hypothetical protein MJ0882 |Hypothetical protein MJ0882 |Methanococcus jannaschii [TaxId: 2190]
 d4pcac_ :    (THR42)  (ILE215)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 1217107]
 d3ntvb_ :    (ARG57)  (ILE229)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
 d3r3ha_ :    (ALA45)  (PRO219)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
 d3e05b_ :   (GLN234)  (LYS402)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
 d4pcaa_ :    (THR42)  (ILE215)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 1217107]
 d4oa5a_ :    (GLY41)  (ILE215)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
 d3njra_ :    (SER20)  (SER173)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 272942]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66