Protein Concepts Dictionary

Tableau information

Concept source:  d3kgwa_  amino acid (a.a.) range (GLN159)(GLY328)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN159)  (LYS169) H1
	  (VAL171)  (VAL176) E2
	  (VAL176)  (GLY183) H3
	  (GLY183)  (ASP189) E4
	  (PHE191)  (ARG197) H5
	  (CYS200)  (SER206) E6
	  (ASP223)  (SER227) E7
	  (SER229)  (ASN234) H8
	  (SER240)  (ASN245) E9
	  (ASN245)  (ARG255) H10
	  (ASP265)  (GLY274) H11
	  (VAL288)  (GLY305) H12
	  (LEU306)  (GLY328) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      146.1°   E2                                                                                  
H3      108.8°  -44.3°   H3                                                                           
E4      -77.2° -135.4°  161.6°   E4                                                                    
H5      -24.6°  162.4°  118.1°   60.8°   H5                                                             
E6      130.7°  -19.1°   47.2° -141.1°  154.1°   E6                                                      
E7      115.8°  -31.0°   37.8° -155.4°  137.8°  -16.6°   E7                                               
H8     -164.6°   42.5°   84.2°  -93.0° -152.7°   53.0°   69.4°   H8                                        
E9      -72.3°  141.6° -148.2°   15.7°  -51.6°  153.4°  169.8°  101.2°   E9                                 
H10      19.0° -128.1°  -90.0°   96.0°   38.8° -115.3°  -99.2° -167.3°  -89.7°   H10                         
H11    -122.1°   65.4°  106.7°  -83.0° -130.5°   59.7°   72.4°  -43.9°  -98.2° -128.4°   H11                  
H12    -136.8°   76.3°  102.4°  -64.7° -113.1°   92.4°  107.2°   42.4°  -65.5°  150.3°  -73.9°   H12           
H13     110.3°   54.9°   23.6° -138.1°  109.2°   65.1°   59.8°   84.9° -124.8°   94.4°  120.2°   87.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4kxka_ :   (THR135)  (GLY306)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3kgxb_ :   (GLN159)  (GLN304)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4kyoc_ :   (THR135)  (GLY306)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yoba_ :   (GLN137)  (GLY306)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4cbsa_ :   (THR135)  (GLY306)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4kyoa_ :   (THR135)  (GLY306)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3kgwa_ :   (GLN159)  (GLY328)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67