Tableau information
Concept source: d1nytd1 amino acid (a.a.) range (ASP102)(LEU270)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEHEHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP102) (SER114) H1
(ARG121) (GLY126) E2
(GLY129) (LEU141) H3
(ALA144) (ARG150) E4
(VAL152) (PHE162) H5
(GLY166) (SER172) E6
(ASP182) (THR188) E7
(THR188) (GLY194) H8
(GLY207) (MET213) E9
(THR220) (GLY230) H10
(LYS232) (GLY237) E11
(GLY237) (TRP252) H12
(GLU260) (LEU270) H13
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 140.7° E2
H3 -53.9° -163.5° H3
E4 121.2° -27.1° -166.8° E4
H5 -86.2° 126.8° -36.8° 152.3° H5
E6 97.4° -57.1° 137.4° -30.1° -164.3° E6
E7 143.6° -6.5° 157.5° -33.6° 120.7° -63.7° E7
H8 76.5° 64.2° 129.2° 51.4° -144.8° 50.5° -67.5° H8
E9 147.1° -23.9° 140.8° -51.0° 104.2° -81.0° -17.4° -77.5° E9
H10 -31.5° 146.7° -48.9° 119.6° -85.5° 89.7° 153.2° 94.5° 170.3° H10
E11 148.7° -41.2° 122.9° -68.3° 86.2° -98.1° -34.8° -92.9° -18.1° 171.6° E11
H12 125.6° -79.4° 84.5° -106.2° 47.9° -135.1° -73.1° -122.2° -56.3° 133.4° -38.3° H12
H13 -84.4° 63.3° -133.0° 37.6° -169.8° 17.4° 69.4° 35.1° 85.9° -84.4° 103.9° 142.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1nyta1 : (ASP102) (GLU269) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase AroE |Escherichia coli [TaxId: 562]
d1nytc1 : (ASP102) (GLU269) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase AroE |Escherichia coli [TaxId: 562]
d4fq8a2 : (LEU107) (PHE263) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d4omua2 : (ASP101) (ARG273) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d1nytd1 : (ASP102) (LEU270) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase AroE |Escherichia coli [TaxId: 562]
d4fr5a2 : (LEU107) (PHE263) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d4fosa2 : (LEU107) (PHE263) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2