Protein Concepts Dictionary

Tableau information

Concept source:  d3gcza_  amino acid (a.a.) range (GLY58)(LEU246)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY58)   (GLY69) H1
	   (GLY75)   (GLY81) E2
	   (GLY85)   (LEU94) H3
	   (LYS98)  (THR104) E4
	  (THR118)  (LEU123) H5
	  (LEU123)  (LYS129) E6
	  (ASP141)  (PRO152) E7
	  (SER153)  (GLY175) H8
	  (GLU179)  (LEU185) E9
	  (PRO190)  (LYS202) H10
	  (GLY206)  (LEU212) E11
	  (HIS218)  (SER224) E12
	  (VAL231)  (LEU246) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      144.7°   E2                                                                                  
H3      -36.4°  170.8°   H3                                                                           
E4      142.7°  -11.7°  177.5°   E4                                                                    
H5       87.7°  -97.6°   91.6°  -86.0°   H5                                                             
E6      135.5°  -25.8°  163.4°  -14.1°  -72.3°   E6                                                      
E7      134.0°  -14.3°  158.0°  -24.1° -109.1°  -37.0°   E7                                               
H8      -50.5°  156.8°  -31.5°  146.3°   61.3°  133.4°  170.3°   H8                                        
E9      134.8°  -11.0°  162.5°  -19.5° -104.0°  -31.9°    5.2°  165.3°   E9                                 
H10     -43.1°  168.3°  -19.9°  157.8°   72.2°  144.5° -177.1°   11.6°  175.1°   H10                         
E11     132.0°  -64.3°  108.2°  -73.9° -134.4°  -86.6°  -62.4°  122.5°  -66.2°  118.6°   E11                  
E12     -42.1°  158.6°  -30.6°  146.9°   61.0°  133.0°  166.9°   -9.7°  162.4°   12.8°  130.5°   E12           
H13     133.5°  -47.4°  123.8°  -58.6° -138.4°  -72.6°  -41.8°  144.5°  -46.3°  138.6°   22.7°  151.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3gcza_ :    (GLY58)  (LEU246)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Yokose virus [TaxId: 64294]
 d2px5b_ :    (GLY58)  (MET244)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Murray valley encephalitis virus (strain mve-1-51) [TaxId: 301478]
 d2wa1b_ :    (GLY59)  (MET246)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Modoc virus [TaxId: 64300]
 d3p8za_ :    (GLY58)  (MET244)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus 3 [TaxId: 11069]
 d2wa2b_ :    (GLY59)  (GLU248)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Modoc virus [TaxId: 64300]
 d3elwa_ :    (ALA59)  (ARG246)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
 d3p8zc_ :    (GLY58)  (PHE242)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus 3 [TaxId: 11069]
 d3emba_ :    (ALA59)  (ARG246)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66