Tableau information
Concept source: d2z0ka_ amino acid (a.a.) range (SER6)(THR148)
nSSEs in this Concept: 13
String of secondary struct.elems. (SSEs) defining this concept: HEHEEHEHEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER6) (GLY18) H1
(HIS21) (LEU27) E2
(THR33) (VAL41) H3
(ILE48) (GLY56) E4
(GLY59) (LEU64) E5
(ASP72) (GLY81) H6
(GLY82) (GLN86) E7
(THR88) (GLU94) H8
(PRO113) (ASP117) E9
(ASP117) (TYR123) H10
(PRO124) (ALA129) E11
(ARG134) (THR140) E12
(THR140) (THR148) H13
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 169.2° E2
H3 -70.9° 107.8° H3
E4 90.8° -93.7° 153.6° E4
E5 -88.8° 84.2° -38.9° 164.1° E5
H6 43.0° -146.4° 95.8° -58.6° 127.8° H6
E7 -140.0° -41.3° 69.3° 124.9° -62.0° 138.9° E7
H8 46.8° -141.8° -56.0° 97.6° -93.7° 42.1° -105.0° H8
E9 -98.6° 71.5° -67.6° 135.9° -28.9° 141.4° -69.5° -120.0° E9
H10 -71.6° 106.6° -2.7° -156.0° 36.3° -97.8° 68.8° -58.5° 64.9° H10
E11 136.2° -53.9° 122.9° -58.7° 129.3° -93.3° 67.5° -102.7° 125.3° 124.3° E11
E12 20.0° 149.2° -69.4° 99.8° -75.3° 61.7° -135.3° 63.6° -79.7° -69.0° 154.2° E12
H13 90.4° -97.9° 131.5° -26.2° 169.6° -48.7° 113.4° 78.3° 160.8° -134.2° 48.0° 106.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2cx5a_ : (SER4) (GLY149) [view usage] : d.116.1.0 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
d2z0ka_ : (SER6) (THR148) [view usage] : d.116.1.0 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1wdva_ : (GLU3) (GLY144) [view usage] : d.116.1.1 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |YbaK/ProRS associated domain |Hypothetical protein APE2540 |Aeropyrum pernix [TaxId: 56636]
d1vkia_ : (THR8) (GLY159) [view usage] : d.116.1.1 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |YbaK/ProRS associated domain |Hypothetical protein Atu3699 |Agrobacterium tumefaciens, strain C58 [TaxId: 358]
d3rijb_ : (SER4) (THR148) [view usage] : d.116.1.0 |YbaK/ProRS associated domain |YbaK/ProRS associated domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.116