Protein Concepts Dictionary

Tableau information

Concept source:  d1ysda1  amino acid (a.a.) range (TRP10)(ASP155)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TRP10)   (GLY29) H1
	   (ILE33)   (ASN39) E2
	   (LEU46)   (HIS50) E3
	   (MET52)   (GLY57) H4
	   (GLY63)   (CYS71) H5
	   (GLU75)   (ASP81) H6
	   (ASP81)   (THR87) E7
	   (CYS91)  (GLY102) H8
	  (PRO104)  (GLY109) E9
	  (LYS120)  (GLY126) H10
	  (GLU128)  (ASP133) E11
	  (ASP134)  (PRO149) H12
	  (PRO149)  (ASP155) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      145.8°   E2                                                                                  
E3      -36.3°  175.2°   E3                                                                           
H4       39.6° -106.9°   74.4°   H4                                                                    
H5      109.4°  -37.8°  145.4°   73.9°   H5                                                             
H6     -104.9°  106.8°  -73.2°  143.8°  130.7°   H6                                                      
E7      -41.5°  165.4°  -18.4°   80.9°  139.9°  -63.5°   E7                                               
H8      139.7°   -6.5°  172.2°  100.5°   33.2° -113.2°  168.5°   H8                                        
E9      -57.2°  143.6°  -39.9°   93.4°  129.9°   50.8°  -21.8°  147.6°   E9                                 
H10     145.6°  -18.5°  156.8°  107.2°  -50.2° -108.9° -169.7°  -18.8° -156.6°   H10                         
E11     -57.7°  140.9°  -42.8°  -92.8°  126.3°   51.9°  -24.5°  144.6°   -3.6° -155.2°   E11                  
H12      21.1° -144.4°   34.7°   43.4°  117.1° -107.7°   48.6°  138.2°  -69.1°  134.0°  -70.7°   H12           
H13     122.7°  -40.0°  136.2°   88.3°   55.7° -126.7° -154.5°   36.6° -174.4°   25.0° -177.9° -109.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2o3kb_ :   (TRP210)  (ASP355)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2o3ka_ :    (TRP10)  (ASP155)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ysba1 :    (TRP10)  (ASP155)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1p6oa_ :    (TRP10)  (ILE156)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1p6ob_ :   (ASP211)  (ILE356)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ox7a_ :    (ASP11)  (ASP155)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ysda1 :    (TRP10)  (ASP155)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ysdb_ :   (ASP211)  (GLY357)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1rb7a_ :    (TRP10)  (ILE156)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1uaqa_ :    (ASP11)  (ASP155)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ox7b_ :   (ASP211)  (ASP355)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ysbb_ :   (TRP210)  (ASP355)   [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Cytosine deaminase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.97