Protein Concepts Dictionary

Tableau information

Concept source:  d4ih1a_  amino acid (a.a.) range (VAL3)(SER119)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEEHHEHHHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL3)    (ASN9) H1
	    (ASN9)   (GLY14) E2
	   (ALA18)   (HIS24) E3
	   (ASP29)   (TRP33) H4
	   (TRP33)   (ASP43) H5
	   (ARG45)   (ASP50) E6
	   (ASN58)   (PHE62) H7
	   (ASP63)   (SER68) H8
	   (GLU71)   (LYS85) H9
	   (ILE90)   (HIS94) E10
	   (VAL96)  (ARG108) H11
	  (ARG108)  (SER113) H12
	  (SER113)  (SER119) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2      101.3°   E2                                                                                  
E3       53.8°  154.9°   E3                                                                           
H4      -80.5°   22.0°  133.2°   H4                                                                    
H5     -134.1°  -33.0° -172.1°   54.7°   H5                                                             
E6       70.0°  171.2°  -16.4°  149.4° -155.7°   E6                                                      
H7     -103.6°  106.4°  -79.7°  104.8°   97.9°  -75.4°   H7                                               
H8      -78.5°   62.2° -104.7°   50.3°   80.0° -113.6°  -57.3°   H8                                        
H9     -121.1°  -42.4°  149.0°  -61.2°  -30.5°  142.9°  127.2°  103.5°   H9                                 
E10      41.2°  142.5°  -12.9°  121.4°  173.9°  -28.8°  -87.5° -101.0°  144.7°   E10                         
H11    -161.3°  -71.0°  131.3°  -88.9°  -42.2°  117.0°   64.1°   82.9°  -65.0°  143.8°   H11                  
H12     -54.4°   51.7° -106.0°  -37.8°   81.2° -120.7° -132.6°  -76.2°   68.8°  -93.2° -122.4°   H12           
E13      26.5°  127.8°  -27.7°  107.0°  159.8°  -43.6°  -95.1°  -94.4°  137.3°  -14.8° -156.9°   78.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4hrxa_ :     (VAL3)  (SER119)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4hrya_ :     (VAL3)  (SER119)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4dnpa_ :     (THR4)  (GLY120)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]
 d4ih1a_ :     (VAL3)  (SER119)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1womb_ :     (HIS1)  (GLY120)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3w06a_ :     (VAL3)  (SER119)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4dnqc_ :     (THR4)  (GLY120)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]
 d4dnqi_ :     (THR4)  (GLY120)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]
 d4dnqa_ :     (THR4)  (GLY120)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Petunia hybrida [TaxId: 4102]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69