Protein Concepts Dictionary

Tableau information

Concept source:  d1dwoa_  amino acid (a.a.) range (SER115)(ALA256)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEEHHEHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER115)  (PHE125) H1
	  (ASP130)  (THR135) E2
	  (GLU142)  (LYS148) E3
	  (GLY150)  (THR160) H4
	  (THR163)  (VAL173) H5
	  (ARG175)  (GLN181) E6
	  (GLN181)  (ARG187) H7
	  (THR191)  (SER197) H8
	  (LYS199)  (TRP204) E9
	  (LEU212)  (ASN222) H10
	  (ASP226)  (GLN232) E11
	  (LEU238)  (THR243) H12
	  (GLU244)  (ALA256) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2     -144.9°   E2                                                                                  
E3       46.3°  153.7°   E3                                                                           
H4      100.4° -111.7°  -77.5°   H4                                                                    
H5     -121.1°   24.8° -141.2°  136.3°   H5                                                             
E6     -111.2°  -65.0°  140.6°   76.6°  -76.1°   E6                                                      
H7     -138.7°  -58.5° -135.0°   57.6°   80.8°  -35.2°   H7                                               
H8      -56.0°  153.6°   14.6°  -63.0°  152.2° -131.7° -120.5°   H8                                        
E9      -11.2° -138.5°   45.7°  109.2° -113.8° -119.2° -149.4°   57.9°   E9                                 
H10     153.1°   50.5° -135.0°  -61.6°   74.8°   48.0°   14.9° -120.8° -164.1°   H10                         
E11     -24.6°  144.2°   29.5°  102.6° -120.7° -135.8° -157.0°   43.3°  -18.5° -163.8°   E11                  
H12      79.4°  134.8°  -39.8°  -41.4°  151.4°  117.4°   96.5°   25.6°   82.9°  -95.3°   68.8°   H12           
H13     153.1°  -50.1° -135.5°   62.0°   74.4°   47.6°   14.8°  121.3°  164.1°    0.5°  164.2°  -95.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3stta_ :   (ASP120)  (LYS263)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lycopersicon hirsutum [TaxId: 283673]
 d2wfma_ :   (PRO133)  (SER262)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |automated matches |Rauvolfia serpentina [TaxId: 4060]
 d1xkla_ :   (PRO127)  (LYS258)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1y7ha_ :   (PRO127)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d3stxa_ :   (ASP120)  (LYS265)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lycopersicon hirsutum [TaxId: 283673]
 d1scia_ :   (SER115)  (THR255)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
 d1xklc_ :   (PRO127)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1dwoa_ :   (SER115)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d3rksa_ :   (SER115)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1y7ib_ :   (PRO127)  (HIS263)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1e89a_ :   (SER115)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d3stya_ :   (ASP120)  (LYS265)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lycopersicon hirsutum [TaxId: 283673]
 d1eb8b_ :   (SER115)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1dwob_ :   (SER115)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d3dqza_ :   (HIS117)  (TYR257)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1eb8a_ :   (SER115)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1e89b_ :   (SER115)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d3gzja_ :   (PRO133)  (SER262)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |automated matches |Rauvolfia serpentina [TaxId: 4060]
 d1y7he_ :   (PRO127)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1qj4a_ :   (TYR116)  (THR255)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
 d1xklb_ :   (PRO127)  (ALA256)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1y7hb_ :   (PRO127)  (LYS258)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69