Protein Concepts Dictionary

Tableau information

Concept source:  d3egwb_  amino acid (a.a.) range (MET222)(LEU406)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEEHEHHHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET222)  (CYS227) H1
	  (LYS231)  (ASN235) E2
	  (LYS240)  (GLY254) E3
	  (THR257)  (CYS263) H4
	  (ILE267)  (ASP276) E5
	  (ASP276)  (ILE280) H6
	  (ILE280)  (THR286) H7
	  (ASN288)  (PHE300) H8
	  (ASP305)  (GLY316) H9
	  (PRO318)  (LYS338) H10
	  (MET352)  (PRO361) E11
	  (VAL387)  (LEU393) H12
	  (LYS400)  (LEU406) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2     -161.9°   E2                                                                                  
E3       66.9°  112.5°   E3                                                                           
H4      -41.9°  120.3°   66.7°   H4                                                                    
E5       99.9°  -98.2°  -89.8° -140.0°   E5                                                             
H6      104.9°  -74.2°  171.1°  105.1°  -95.1°   H6                                                      
H7       63.3° -109.9°  127.7°   66.2°  113.0°  -43.4°   H7                                               
H8      -97.3°   84.8°  -30.6°  -91.5°   80.7° -157.8°  157.1°   H8                                        
H9     -174.5°  -18.4° -107.7° -136.2°   80.4°  -80.5° -121.7°  -77.3°   H9                                 
H10     -50.1°  123.0°  115.6°   59.0° -110.4°   55.7°   13.4° -146.1°  135.0°   H10                         
E11     -45.2°  118.2°   92.0°   26.2°  139.4°   79.5°   40.2° -117.7° -136.6°   35.0°   E11                  
H12     142.7°   53.4°  -90.1° -152.3°  -48.9°  -98.7° -140.7°   62.1°   35.1° -148.7°  171.4°   H12           
H13     -69.5°  -97.9°   40.7°  -40.2°  130.2° -134.6° -105.0°   54.4° -106.0°   99.2°  -65.0°  112.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1y4zb1 :   (MET222)  (LEU406)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
 d3egwb_ :   (MET222)  (LEU406)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
 d1r27b_ :   (MET222)  (LEU406)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
 d1siwb_ :   (MET222)  (GLY423)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
 d1q16b_ :   (MET222)  (GLY423)   [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58