Protein Concepts Dictionary

Tableau information

Concept source:  d3mh9c_  amino acid (a.a.) range (LYS42)(GLY170)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS42)   (LEU55) H1
	   (HIS59)   (GLY66) E2
	   (LYS74)   (THR82) E3
	   (THR85)   (GLY89) E4
	   (GLY89)   (THR94) E5
	   (GLY97)  (PHE107) E6
	  (ILE110)  (THR114) E7
	  (GLN119)  (GLY124) E8
	  (ASN137)  (GLY141) H9
	  (LEU142)  (ASN148) H10
	  (ASP151)  (GLY156) E11
	  (GLY156)  (ASN161) E12
	  (ASN164)  (GLY170) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2     -117.8°   E2                                                                                  
E3       66.1°  150.0°   E3                                                                           
E4      103.4°  -65.3°  144.6°   E4                                                                    
E5     -109.3°    8.6° -150.4°  -64.5°   E5                                                             
E6       62.4°  154.6°    5.4° -139.9°  153.9°   E6                                                      
E7       97.2°  -69.2°  140.7°   -6.3°  -67.5°  135.7°   E7                                               
E8      -95.4°   83.5°  -66.6°  148.4°   85.5°  -71.5°  152.7°   E8                                        
H9      145.6°   32.5° -147.5°  -54.9°   39.7° -151.7°  -61.0°   95.9°   H9                                 
H10    -157.7°   62.7° -102.2°   96.8°   71.0° -107.0° -103.1°   62.3°  -45.9°   H10                         
E11      96.4°  101.6° -107.6°   37.8°  101.9° -103.6°   36.2° -163.1°   81.0° -105.4°   E11                  
E12      28.9°  125.0°  -73.9°   82.2°  117.1°  -68.7°   76.0° -122.6°  136.1° -169.8°  -67.7°   E12           
E13    -101.3°  -45.3°  105.1° -110.1°  -45.7°  109.4° -113.1°   40.2°  -68.6°   62.2°  146.9°  127.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3mh8a_ :    (LYS42)  (GLN175)   [view usage] : b.125.1.0 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3mh9c_ :    (LYS42)  (GLY170)   [view usage] : b.125.1.0 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3mhaa_ :    (PRO43)  (GLY170)   [view usage] : b.125.1.0 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3mh9a_ :    (LYS42)  (SER169)   [view usage] : b.125.1.0 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 b.125