Protein Concepts Dictionary

Tableau information

Concept source:  d3zyea_  amino acid (a.a.) range (MET0)(ASN139)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET0)   (ARG13) H1
	   (SER16)   (GLU21) E2
	   (THR26)   (TYR31) E3
	   (ARG33)   (PRO38) E4
	   (PRO45)   (LEU48) E5
	   (GLN52)   (LEU57) E6
	   (LEU57)   (GLU61) E7
	   (GLU71)   (LYS76) E8
	   (GLU93)   (ASN98) E9
	   (ASN98)  (THR106) E10
	  (ASN111)  (PRO115) E11
	  (GLY117)  (GLU121) E12
	  (ARG134)  (ASN139) E13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                         
E2       63.8°   E2                                                                                  
E3       75.0°  117.1°   E3                                                                           
E4     -124.4°  -62.3°  143.9°   E4                                                                    
E5     -100.2°  121.6° -110.5°   96.4°   E5                                                             
E6       84.5°  -75.3°   54.6°  -94.3°  162.9°   E6                                                      
E7     -142.3°  -80.9°  113.4°  -31.9°  109.6°  -73.7°   E7                                               
E8       43.3°  107.0°  -51.4°  163.3°  -77.9°   95.2°  164.7°   E8                                        
E9     -135.0° -111.8°  130.8°  -60.1°   40.8° -139.9°  -68.9°  118.0°   E9                                 
E10     -30.2°  -59.1°  102.7° -105.6°   79.5° -110.3° -135.3°   58.1° -106.5°   E10                         
E11     152.9°  100.8°  -95.1°   53.1°  106.9°  -69.5°   22.4° -143.6°  -70.3°  157.7°   E11                  
E12      73.2°   61.4°  -62.4°   92.3° -171.1°  -15.2°   78.8°  -93.3° -147.7°   96.4°   79.8°   E12           
E13    -123.7° -102.3°  140.4°  -58.6°   38.1° -148.1°  -74.5°  115.4°   12.8°  -94.4°   79.9°  150.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3zyea_ :     (MET0)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
 d3ruoa_ :     (GLY1)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human enterovirus b [TaxId: 138949]
 d3zz4a_ :     (GLY1)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus [TaxId: 12072]
 d3zzca_ :     (PRO2)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus [TaxId: 12072]
 d3qzrb_ :     (ASP5)  (ASN139)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
 d3zz3a_ :     (GLY1)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus [TaxId: 12072]
 d3q3ya_ :     (GLY1)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human enterovirus b [TaxId: 138949]
 d2zu1a_ :     (GLY1)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
 d3sjoa_ :     (LEU4)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human enterovirus 71 [TaxId: 39054]
 d2ijd11 :     (GLY3)  (GLY128)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human poliovirus 1 Mahoney [TaxId: 12081]
 d3zyda_ :     (GLY1)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
 d3r0fa_ :     (PRO2)  (ASN139)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
 d2ztxa_ :     (GLY1)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
 d1cqqa_ :     (PRO2)  (SER139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human rhinovirus 2 [TaxId: 12130]
 d3r0fb_ :     (ASP5)  (ASN139)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
 d3osya_ :     (PRO2)  (ASN139)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human enterovirus 71 [TaxId: 39054]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47