Protein Concepts Dictionary

Tableau information

Concept source:  d4h31b1  amino acid (a.a.) range (ASN7)(HIS149)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHHHEHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASN7)   (LYS12) E1
	   (LYS12)   (SER17) H2
	   (SER17)   (GLY38) H3
	   (LYS42)   (LYS47) H4
	   (LYS47)   (PHE53) E5
	   (THR60)   (GLY72) H6
	   (ALA73)   (GLY79) E7
	   (GLN84)   (GLU89) H8
	   (SER90)  (MET101) H9
	  (ASP103)  (GLY109) E10
	  (GLN112)  (ALA122) H11
	  (VAL124)  (LEU130) E12
	  (THR137)  (HIS149) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2     -123.9°   H2                                                                                  
H3     -103.6°  100.4°   H3                                                                           
H4     -101.6°  124.0°  -98.3°   H4                                                                    
E5      -23.8° -140.6° -108.6°  -77.9°   E5                                                             
H6      157.9°   45.7°   65.8°  -99.2° -173.5°   H6                                                      
E7      -42.6°  149.4° -109.3°   59.0°  -18.9° -157.6°   E7                                               
H8      -90.9°  102.4°  139.2°   41.0°  -71.9°  109.8°   58.4°   H8                                        
H9      137.7°  -54.5°   47.7°  111.8°  154.2°  -22.2°  156.0°  131.4°   H9                                 
E10     -12.8° -133.9° -106.1°  -88.8°  -11.0°  169.3°  -29.8°  -80.9°  147.2°   E10                         
H11    -174.5°  -52.5°   81.6°   79.3°  156.1°  -23.8°  137.7°   86.3°  -45.2°  166.8°   H11                  
E12      16.6° -124.7°  -87.5° -108.3°  -34.9°  144.2°  -52.1° -106.0°  122.4°  -25.1°  167.5°   E12           
H13      79.5°  -62.8°  -69.8° -167.8° -103.0°   78.6° -121.4° -151.0°  -62.5°  -92.1° -100.8°  -69.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xjwa1 :     (GLN6)  (THR148)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d3npma1 :     (GLN6)  (GLY150)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d4h31a1 :     (ASN7)  (HIS149)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
 d1i5oa1 :     (GLN6)  (GLY150)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d4anfa1 :     (GLY7)  (PHE152)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Mycoplasma penetrans [TaxId: 28227]
 d4h31b1 :     (ASN7)  (HIS149)   [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
 d1ekxa1 :     (GLN6)  (GLY150)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
 d1d09a1 :     (GLN6)  (THR148)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.78