Protein Concepts Dictionary

Tableau information

Concept source:  d1t7na2  amino acid (a.a.) range (ASP406)(HIS621)

nSSEs in this Concept: 13

String of secondary struct.elems. (SSEs) defining this concept: EHHEEHHHHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP406)  (HIS416) E1
	  (ASP420)  (LYS426) H2
	  (PRO429)  (TYR445) H3
	  (CYS449)  (MET459) E4
	  (ARG464)  (ARG469) E5
	  (SER472)  (ASP484) H6
	  (PRO488)  (GLY513) H7
	  (PHE516)  (LEU531) H8
	  (THR541)  (MET547) H9
	  (SER552)  (ALA558) E10
	  (ASP572)  (GLU582) E11
	  (ASN586)  (TYR592) E12
	  (ALA600)  (HIS621) H13

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                         
H2       58.0°   H2                                                                                  
H3      126.2°  109.8°   H3                                                                           
E4      -70.0°  -76.6°  163.7°   E4                                                                    
E5       81.2°   74.4°  -47.3°  146.9°   E5                                                             
H6       73.8°  102.2°  -57.1°  137.6°  -38.8°   H6                                                      
H7     -113.5°  -97.9°  120.2°  -43.5°  157.1° -159.2°   H7                                               
H8     -152.0° -103.0°   77.6°  -86.4°  115.4° -133.4°   44.3°   H8                                        
H9      -61.9° -118.2°  115.9°  -71.0°  109.8°   73.0°  -92.9° -125.1°   H9                                 
E10     -47.4°  -92.3°  147.3°  -42.8°  123.0°   95.7°  -78.2° -121.6°  -31.8°   E10                         
E11     -27.2°  -74.3°  146.5°  -48.9°  107.0°   89.4°  -91.0° -135.1°  -44.8°  -20.8°   E11                  
E12     158.0°  110.3°  -35.8°  128.3°  -77.5°  -92.5°   85.4°   41.9°  131.2°  153.8°  174.6°   E12           
H13     -25.2°   33.3°  119.3°  -74.6°   72.4°   82.1° -113.0°  134.8°  -87.1°  -68.0°  -47.4°  138.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ndfa2 :   (ASP406)  (HIS621)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d1xl7b2 :   (ASP393)  (ALA610)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
 d1xmcb2 :   (ASP393)  (ALA610)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Peroxisomal carnitine O-octanoyltransferase, COT |Mouse (Mus musculus) [TaxId: 10090]
 d1t7qa2 :   (ASP406)  (PRO622)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d1t7na2 :   (ASP406)  (HIS621)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d1nm8a2 :   (LEU386)  (SER599)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d1ndba2 :   (ASP406)  (LYS625)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.43